Gene Pden_4719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4719 
Symbol 
ID4583222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp206786 
End bp206965 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content56% 
IMG OID639772023 
Productperiplasmic nitrate reductase NapE 
Protein accessionYP_918476 
Protein GI119387442 
COG category[C] Energy production and conversion 
COG ID[COG4459] Periplasmic nitrate reductase system, NapE component 
TIGRFAM ID[TIGR02973] periplasmic nitrate reductase, NapE protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0612346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0196306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATT CCGCAAAAGA AACCGATCGT CCCAAGCACC AGAAGCGGGA TGAAATCATC 
GCCTTCCTGA TCCTTGCGGT GGTGATCTGG CCGATCCTGT CGGTCGCGAT CGTCGGCGGC
TACGGATTCA TCGTCTGGAT GTCTCAGATC ATCTTCGGAC CCCCCGGACC CATGCATTAG
 
Protein sequence
MIDSAKETDR PKHQKRDEII AFLILAVVIW PILSVAIVGG YGFIVWMSQI IFGPPGPMH