Gene Pden_4688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4688 
Symbol 
ID4583191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp182270 
End bp182818 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content70% 
IMG OID639771992 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_918445 
Protein GI119387411 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.80799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.175977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG CGACGCCGGC CACGCAATTC CTGCGCCGGG CGCAAGTGGC CTTTCGGCCC 
GTGGAATACC GCTATGATCC GGGGTCCGAG CGGGTCGCAT TGCAGGCGGC CGAGGCGATC
GGCCTGCCGC CCGGACAACT GCTCAAGACG CTGATGGTGG AGGTGGACGG GCGTCCCGCC
TGTGCGGTCC TTCCCGGCGA CCGCAGCCTG TCGATGAAGC GCGTCGCGGC CGCCTTCGGC
GGCGATGATG CCTGCCGACA AGGCGCAGCG GCTGACCGGC TATCATACCG GCGGCATCAG
CCCTTTCGGC CAGCGCCGCA CAGTGCCGGT GATCTTCGAG GCCGAGGCCA TGGAGTTCGG
CGAGGTCGCG ATCAACGGCG GCCGGCGCGG GCTGTTGCTG CTGCTGTCGC CGCGCGATGC
GGTGGCCGCG CTTGGCGCAC GGGCCGAGGC ACTGTCGGCC TAGGCGGTTG CTGGGGACTG
TGCGGTTTGG CCTTGCGCCG TGGCGGGTCC GGGCAGAAAT CGGTTCCAGC GAATCGGAGT
TTATGTTAA
 
Protein sequence
MSGATPATQF LRRAQVAFRP VEYRYDPGSE RVALQAAEAI GLPPGQLLKT LMVEVDGRPA 
CAVLPGDRSL SMKRVAAAFG GDDACRQGAA ADRLSYRRHQ PFRPAPHSAG DLRGRGHGVR
RGRDQRRPAR AVAAAVAARC GGRAWRTGRG TVGLGGCWGL CGLALRRGGS GQKSVPANRS
LC