Gene Pden_4681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4681 
Symbol 
ID4583184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp173066 
End bp173680 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content67% 
IMG OID639771985 
ProductTetR family transcriptional regulator 
Protein accessionYP_918438 
Protein GI119387404 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.972531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGGT CTTCGGCCGA GCAGGCGCAG CGGAACCGGG CAAAGGTCGT GGAATGCGCC 
AGCCGCCTGT TCCGCGCCCG CGGGGTCGAG GCGGTGTCGG TGGCCGACAT CATGGCTGCC
GCGGGAATGA CGGTTGGCGG GTTCTACAAG CATTTCGCCT CGAAGGAGGC CCTGGCCAGG
GAAGCCTGCG CCTTGTCCTT CGCCCAGGCG GACGAATCCT GGCAGGGCTT TCCAGCGCAT
GCCGAAAGCA GGCAGGACGG CGGGATCTCC GCGATTGTCC GTCACTATTT CAGGGAACGT
CCCGCCCACC TGACTTGCCC CATGCTTGCC TATGCTCCCC ATCTTTCAGG TGGAGAAACC
GCTGTCCCGG CGCAGGACGC CTATGGCGAG GGGGTGGAAA AGCTGCTGGC GGGGTTCCTG
GATCGGGCGG GCGAGGGGAC GGATGCTCCC GAGAGGTTGA GGAACGCCCG GATCATCTTC
GCCGCCATGA TCGGCGCCAA GCTTCTGGCG CAAGCGTCCG GCAATGCCGG TTGGGCGAGG
TCGTTGCAGG ACGCGGTCGC CGAAGGGGCA GGGGGGCTTT GCCCTGAGGG TCAGTCCGCG
TCGGGCACGA GTTGA
 
Protein sequence
MGRSSAEQAQ RNRAKVVECA SRLFRARGVE AVSVADIMAA AGMTVGGFYK HFASKEALAR 
EACALSFAQA DESWQGFPAH AESRQDGGIS AIVRHYFRER PAHLTCPMLA YAPHLSGGET
AVPAQDAYGE GVEKLLAGFL DRAGEGTDAP ERLRNARIIF AAMIGAKLLA QASGNAGWAR
SLQDAVAEGA GGLCPEGQSA SGTS