| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4672 |
|---|
| Symbol | |
|---|
| ID | 4583175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | + |
|---|
| Start bp | 164133 |
|---|
| End bp | 165164 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639771976 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_918429 |
|---|
| Protein GI | 119387395 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.626925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATC GGAGCCGTAA CCTGACCAGT CAGTCCCCGG AAGCTTTGGC TGGTTCCGCG
GTCACCGCGG GCCCGGCCTA TGCCACCATC GAGGCCCGAA TCCGCAAGAG CATCGAGGCG
GGTGCCCTGC CGGACGGAAC CGTGTTGCTG GAGGGGCCGC TGGCGGCCCT CTTCGGCTCC
AGCCGCTCGC CCGTGAAGCG CGCGCTGTCG GCCCTGGAGG AGGACGGGCT GCTCAGCCGT
TTCGACGGGC GGGGACTGCT GGTCGGAAAC AAGGGCATAC CTCGCCGTGT GAAGATCCTT
CCCGACATGC TGTTGCTTGA CGACGACGAA GGTCTCAATG CCAAGAGCTT CGCCTGGCAA
CCGCATTACT ATGATTTTGA ACGCGAGATC ATCCTGCGTT CGGTCTTTGG CCGTGCGCGG
GTGAACGAAC TGGCGCTGGC GCGGCACCTG GATGTCAGCC GCACCGTGGC GCATGACCTG
CTGATCCACG CGCGCGAGGT GGGGATCGTC TACAAGGACG ACGGGTCGCG CTGGTGGATC
GTGCCGCTGG ACGAGGCACG ATTCGATAAC CTTTATGAAC TGCGTATCCT GCTGGAGCCC
GTGGCCATGA CCAGCGCCAT CGGTCGTATC CCGGACGAGC GCCTGGACGA GATCGAGGCC
CGGCTGCATC GCGTGCAGGA GCGATTCCCC GCCGTCACCG GCGCCGATCT GGATCTTCTG
GAATCCGATC TGCATATCGA CTGCATCGGC CATGGCTGCA ATCCAGAGAT CATCGAGGCG
CTGAAGCGCA GTCACTGCAT TCTCGTGGCC GGCAAGCACA TCCAATTGGC GCTTGGTTCG
GATGCACGCG TCGATCCCTT CATGGACGAG CATCTTGAGA TCGTGGCTGC GTTGCGTGCG
CAAGACCCCA TTGCGGTGCG CGAGACGCTG GTCCGGCACC TGGAGCTTTC GGCCGAAAAG
GCCGTCCATC GTCTTGCGGC CTTCCGCGGC AGCCAGAGAG TGGCTGAACT GCCCTACATA
CTGGAGCCGT GA
|
|---|
| Protein sequence | MADRSRNLTS QSPEALAGSA VTAGPAYATI EARIRKSIEA GALPDGTVLL EGPLAALFGS
SRSPVKRALS ALEEDGLLSR FDGRGLLVGN KGIPRRVKIL PDMLLLDDDE GLNAKSFAWQ
PHYYDFEREI ILRSVFGRAR VNELALARHL DVSRTVAHDL LIHAREVGIV YKDDGSRWWI
VPLDEARFDN LYELRILLEP VAMTSAIGRI PDERLDEIEA RLHRVQERFP AVTGADLDLL
ESDLHIDCIG HGCNPEIIEA LKRSHCILVA GKHIQLALGS DARVDPFMDE HLEIVAALRA
QDPIAVRETL VRHLELSAEK AVHRLAAFRG SQRVAELPYI LEP
|
|---|
| |