| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4618 |
|---|
| Symbol | |
|---|
| ID | 4583123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 103562 |
|---|
| End bp | 104329 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639771924 |
|---|
| Product | Asp/Glu racemase |
|---|
| Protein accession | YP_918377 |
|---|
| Protein GI | 119387343 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3473] Maleate cis-trans isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATG ACGGCAATGT CGGGCTCGCG ATGCTTACCC CTTCGTCGAA CACCGTTGTG
GAACCCTTGA CCAGCGCGAT GGCCTGGCCG CTCTATCCAG ATGTGAGCGT GCATTTCGGA
CGTTTCCGAG TGACCAGAAT CGCGCTGGAC GAAGGCTCGA ACAGCCAGTT CACGCTTGAA
CCGATCCTCG CGGCCGCGGA TCTGCTGGCC GATGCGAAAC CCGCGATCAT CGCCTGGAAC
GGAACCTCGG CAAGCTGGCT GGGTTTCGAC ACCGACGACC GGCTGTGCGC TGCGATCACC
AAGCGCACCG GTATTCCCGC GACCAGCGCG ATCCTCAGCC TGAACCGGCT GCTGGCCGAG
ATGGGGGTCA AGCGTCTTGG CCTCGTGACG CCCTACACGC GGGACGTGCA GCAGCGGATC
ATCGCAAACT ACGCGGCCAT CGGCATCGAG ACCGTGGCCG AGCGCCATAG CGGGCGGTCC
GACAATCATT CTTTCGCGGA GGTGACCGAA GAGGAGATCC GCGAGATGTG TCTCGATGTG
GCGCAGGCCC GCCCTGATGC GATCGCCATC GTCTGCACCA ACATGCGCGG CCCGCTGATC
GCACCCGAGC TTGAACGGCA GACCGGCATC CCGATCCTGG ACTCGGTGGC CTTTACGCTC
TGGGGATGCC TGCGCGAAAC CGGCGTGCCG ATGGACAGGC TGGCAGGCTA TGGGCAGATG
TTCGTATCAG GGCGCGATCA AGGATTGTGC GCCGTCCCGG CCCAATGA
|
|---|
| Protein sequence | MQNDGNVGLA MLTPSSNTVV EPLTSAMAWP LYPDVSVHFG RFRVTRIALD EGSNSQFTLE
PILAAADLLA DAKPAIIAWN GTSASWLGFD TDDRLCAAIT KRTGIPATSA ILSLNRLLAE
MGVKRLGLVT PYTRDVQQRI IANYAAIGIE TVAERHSGRS DNHSFAEVTE EEIREMCLDV
AQARPDAIAI VCTNMRGPLI APELERQTGI PILDSVAFTL WGCLRETGVP MDRLAGYGQM
FVSGRDQGLC AVPAQ
|
|---|
| |