Gene Pden_4610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4610 
Symbol 
ID4583115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp94555 
End bp95784 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content70% 
IMG OID639771916 
ProductFAD dependent oxidoreductase 
Protein accessionYP_918369 
Protein GI119387335 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACC TCGACGCCGA CACCCGCAAG GACGACCTGC GCACCGGGAC GCCCTTCTGG 
GTCAGGACGC CGAACTCGAC GGTAAAGCCC CTGCCCCGCC TGACCGGCGA CCGCTTCGAC
GTGATCGTGG TGGGCGCGGG CATCTCGGGG GCGCTGGTGG CCGAGGCGCT GACGCAAGCG
GGGAAATCCG TCCTGATCCT GGACCGCCGC CCGCCGGTGC GCGGCTCGAC CCCCGCCTCG
ACGGCCATGA TCCAGCACGA GATCGACGTG CCCCTGACCC GGTTGCGCCG CAGGATCGGC
AAGGACCATG CCGACCGCGC CTGGCTGCGC TCGGCCAGGG CGGTGGCGGA TCTGGTCGCG
CTGGCCGGAA AGCTGGGGCT CGATTGCCGA ATGCGCCCGA AACCCGCGAT CTATCTGGCC
GGAGACGAGA TGGGCGCAAG GGCGCTGTCG AACGAGGCTA AGGCGCGGCA GGAAATCGGC
ATCGGCGCCG AATATCTGGC ACGCGGCGAG TTGATCGGCC GCTTCGGCAT GGACCGTCCG
GCGGCGATCC TGTCCGATGC CTCGGCCTCG GCCAATCCCG CGCAACTGAC GGCCGGGCTG
CTTGGTGCGA CGCTGGCGCG CAAGGCGCAG ATCGTCTCGC CGGTCGAGAT CACCGACATG
GCCGAACTGC CCTCGGGCGT GGCGCTGGCC ACGCACAAGG GCGAGGTGCT GGTGGCGGAG
CACGCAGTCT TCTGCACCGG CTACGAATAC CTGCCGCAGA TGAGGACGAA GTCGCATCAC
GTCACCTCGA CCTGGGCGCT GGCATCAAGG CCGGTGGCCG GCCTGCCCGG CTGGATGCAA
GAGACGATCG TCTGGGAGGC GGCAGACCCC TATCTCTATT TCCGCACCGA CGGGTCGGGC
CGGGTCATCG CCGGGGGCGA GGACGAAGAC GCGGCGAACA CCAATGCCGA CCCGGCCAAG
CTGGCGGCCA AGGCAAAGGT GATCGCCGGC AAGCTGCACG CCCTGACCGG CATCCGTATC
GGCCGGCCCG CCTATGCCTG GTCCGCGCCT TTCGGCGTCA CCGACGACGG CCTGCCGATC
ATCGACCGCG TGCCGGGACA TGAGCGCATC TTCGCGGTGA TGGGCTTCGG CGGCAACGGC
ATCACCTTCT CGATGATCGC CGCGCAGATC GCCGCCGCCG CCATCGCCGG CAAGCCCGAT
CCCGACGCGG ACATCTTTCG CTATCGCTGA
 
Protein sequence
MPDLDADTRK DDLRTGTPFW VRTPNSTVKP LPRLTGDRFD VIVVGAGISG ALVAEALTQA 
GKSVLILDRR PPVRGSTPAS TAMIQHEIDV PLTRLRRRIG KDHADRAWLR SARAVADLVA
LAGKLGLDCR MRPKPAIYLA GDEMGARALS NEAKARQEIG IGAEYLARGE LIGRFGMDRP
AAILSDASAS ANPAQLTAGL LGATLARKAQ IVSPVEITDM AELPSGVALA THKGEVLVAE
HAVFCTGYEY LPQMRTKSHH VTSTWALASR PVAGLPGWMQ ETIVWEAADP YLYFRTDGSG
RVIAGGEDED AANTNADPAK LAAKAKVIAG KLHALTGIRI GRPAYAWSAP FGVTDDGLPI
IDRVPGHERI FAVMGFGGNG ITFSMIAAQI AAAAIAGKPD PDADIFRYR