Gene Pden_4578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4578 
Symbol 
ID4583317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp62405 
End bp62806 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content61% 
IMG OID639771884 
Productcupin 2 domain-containing protein 
Protein accessionYP_918337 
Protein GI119387303 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.753369 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCA GGAAGGGATG GCATGATGGC GACAAACGGA AAAAGCCGAT GAGCGACGCG 
ATAAACCTGG CGGAGAAACT GGCAAGCTTC GACCAAAAAT GGTCGCCCCG GACCGTGGCT
ACGTTCAACG GCCATGACGT GATGGTCGTC AAGGTCGAGG GAGAGTTCAG GTGGCATTCC
CATCCCGACA CGGACGATTT CTTCCTTGTC CTGCAAGGCG AGATCGAGAT CCGGCTGCGG
GACCGGGTGG TGACGCTGAG GGCCGGCGAA ATCTTCGTCG TCCCGAAGGG CGTCGAGCAT
TGCCCCGTCG CCCGCAAGGA GGCCCATCTG CTGCTGATCG AGCCGACCGG CACGTCCAAT
ACCGGCGATG CCGCTACGGC TGCCGAACGC AATCCCATCT GA
 
Protein sequence
MTRRKGWHDG DKRKKPMSDA INLAEKLASF DQKWSPRTVA TFNGHDVMVV KVEGEFRWHS 
HPDTDDFFLV LQGEIEIRLR DRVVTLRAGE IFVVPKGVEH CPVARKEAHL LLIEPTGTSN
TGDAATAAER NPI