Gene Pden_4517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4517 
Symbol 
ID4583101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp988 
End bp1506 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content67% 
IMG OID639771824 
ProductMarR family transcriptional regulator 
Protein accessionYP_918277 
Protein GI119387243 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.045561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.882671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTTG ATATCAACGT ATGGAACCCG CCGCTGTCAA CCTTTCAGAT GCCCGCTGCT 
GTCGACCTTG CCTTCGAGAC CACGCTCATG GTGCGCGACA CCTGCCTGTG CCTGCATGCG
CAGCGGGCGG CGCGTGCGCT GGCGCGACGC TTCGATATCG CGCTGAAACC GGCGGGCATT
TCCAGCGGAC AGTTCTCTTT GCTGATGTCG CTGAACCGGC CGGAGCCGCC GACCCTTGGC
AGCGTGGCGG CGCTGCTGGC GATGGACAGG ACCACCCTGA CGGCCAATCT CAAGCCGTTA
GAACGTCGAA GTCTTGTCGA AACGGCGCCC GATCCGGCGG ACAGGCGCGC GCGCCGGCTG
CGGCTGACGC CGGCCGGCCG GGCGGTCCTG GGCGGGGCGG TGCCGATCTG GCGGCGACTC
CATGCCGAGA TCGAGGCGGC GCTGTCAGAC CCGGACCAGT TGCGCGCTGA TCTGAACCGG
CTTTCGGAGT TCGGGCGTCA GGACGGGTTG GCTGGCTGA
 
Protein sequence
MQVDINVWNP PLSTFQMPAA VDLAFETTLM VRDTCLCLHA QRAARALARR FDIALKPAGI 
SSGQFSLLMS LNRPEPPTLG SVAALLAMDR TTLTANLKPL ERRSLVETAP DPADRRARRL
RLTPAGRAVL GGAVPIWRRL HAEIEAALSD PDQLRADLNR LSEFGRQDGL AG