| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4500 |
|---|
| Symbol | |
|---|
| ID | 4583050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 1714985 |
|---|
| End bp | 1715908 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639771807 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_918260 |
|---|
| Protein GI | 119387205 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2326] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.247482 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA ACGGCAATGG CGGAAAGAAC GGGACCAAGG GGGCGAAATC GCTGCCCGAC
CTGCCCTTTG TCGGCGCGAT CACCCGCTAT CTGGAAAAGG ACGCCCCCGA TGCGCTGCGC
AAGGCGGTCG CGGCCGCTGA CGGCAAGCGC ATCCTCGACC CCGGCTATCC CCATGCCGAG
GAGATGAAGG GCAAGGATTA CGACGAGCGG ATGGCCGGGC TGCAACTGCA GCTGGTGCGG
CTGATGCGCG ACGTGATCCA TACCGGCAAG CGCATGGTGG TGTTGTTCGA GGGCCGCGAC
GCCGCCGGCA AGGGCGGCAC CATCGAGCGC GTGCGCGAGA ACCTGAACCC GCGCTCGGCC
TATATCGTCG CGCTGCCCAA GCCCAGCGAA CGCGAGGCCG GAGAATGGTA TTTCCAGCGC
TACGTCGACT GGCTGCCCGC CAGAGGCGAG ATCGCGCTGT TCGATCGCAG CTGGTATAAC
CGCGGCGTGG TGGAAAAGGT CTTCGGCTTC TGCACGGACG CGCAGCGCGA GACCTTCTTT
CGCCAGTTGC CGCTGTTCGA GACCATGCTG GCCGACGACG GGGTGATCCT GGTCAAGCTG
TGGCTGGAGG TGGGACGGGC CGAGCAGCTC AAGCGTTTCC TCGACCGCGA GCGCGATCCG
CTGAAGCAAT GGAAGCTCAG CCCCATCGAC GTGGACGGGC TGGCGAAATG GGACGATTAC
AGCGCGGCGA TCCGGGACAC GCTGCTGCGC AGCCATTCGG GCATCGCGCC CTGGACGGTG
ATCCGCGCCG ACGACAAGCG CCGCGCCCGG ATCGCCGCGA TCCAGACCAT CCTGCGCGCG
GTCGAGTTCG CCGGCCGCGA CGACGACGTG ATCGGCCAGC CCGACCCGCA AATCACCGGC
GGCCCCGAGA TCCTGCCGGG ATAA
|
|---|
| Protein sequence | MSKNGNGGKN GTKGAKSLPD LPFVGAITRY LEKDAPDALR KAVAAADGKR ILDPGYPHAE
EMKGKDYDER MAGLQLQLVR LMRDVIHTGK RMVVLFEGRD AAGKGGTIER VRENLNPRSA
YIVALPKPSE REAGEWYFQR YVDWLPARGE IALFDRSWYN RGVVEKVFGF CTDAQRETFF
RQLPLFETML ADDGVILVKL WLEVGRAEQL KRFLDRERDP LKQWKLSPID VDGLAKWDDY
SAAIRDTLLR SHSGIAPWTV IRADDKRRAR IAAIQTILRA VEFAGRDDDV IGQPDPQITG
GPEILPG
|
|---|
| |