Gene Pden_4474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4474 
Symbol 
ID4583024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1689272 
End bp1689769 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID639771781 
Producthypothetical protein 
Protein accessionYP_918234 
Protein GI119387179 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCTA AGACCCGTGT CACCGAACCT GGCCCCCGCA CCCAGCCGAC CCCCGAGCCC 
GAACCCGCGC GCAGCCTCGA CACGAGTTAC GACATTCCGG CAGCCGCGCC GCGGGCGCGC
ACCACGCCTT CGGTCCTGTC CTCGGACCTG ACCGTCACCG GCAATATCCA GACCCAGGGC
GACATCCAGA TCGAAGGCAC GGTCGAGGGC GACATCCGTG CCCATCAGCT GGTCGTCGGC
GAAAGCGCCA CCATCCGCGG CGAGATCGTC GCCGAGGAGG TGGTGGTGAA CGGCCGCGTC
GTCGGCCGCG TCCGTGGCCT GAAGGTCCGC CTGACTGCCA CCGCCCGCGT CGAAGGCGAC
ATCATCCACA AGACCATCGC CATCGAATCC GGCGCCCATT TCGAAGGCTC GGTCCAGCGC
CAGGAAGATC CGCTGGCCAA TGGCGTCACC AAGAAGCTGG CGCCCCCCAC CGCGCGCGAG
GCCGACGCGG CCGAGTGA
 
Protein sequence
MFSKTRVTEP GPRTQPTPEP EPARSLDTSY DIPAAAPRAR TTPSVLSSDL TVTGNIQTQG 
DIQIEGTVEG DIRAHQLVVG ESATIRGEIV AEEVVVNGRV VGRVRGLKVR LTATARVEGD
IIHKTIAIES GAHFEGSVQR QEDPLANGVT KKLAPPTARE ADAAE