| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4429 |
|---|
| Symbol | |
|---|
| ID | 4582979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1635124 |
|---|
| End bp | 1637520 |
|---|
| Gene Length | 2397 bp |
|---|
| Protein Length | 798 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639771736 |
|---|
| Product | glycogen/starch/alpha-glucan phosphorylases |
|---|
| Protein accession | YP_918189 |
|---|
| Protein GI | 119387134 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0058] Glucan phosphorylase |
|---|
| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGG ACGAGATGCC CAAGAGCGAT TTCCGCGATG CAATCCTGTG GCACCTGACC
TATACGCTGG GCAAGGATCC GGATCATGCG CAGGTCTTCG ACTGGCGGCT GGCGCTGAGC
CATGCGGTGC GCGACCGCAT CGTGGATCGC TGGATGGCAT CCACCCGCGC CACCTATCGC
GCCGATGCCA AGCGGGTCTA TTACCTGTCG ATGGAATTCC TGATCGGCCG GCTGCTTCAG
GACAATATCG TCAACCTGCA ACTGGCCGAC CAGGCGCAGG CGGCGATCGA GAGCTTCGGC
CTCGATTACC GCGACCTGCT GCTGGACGAG CCCGACGCGG CGCTGGGCAA CGGCGGGCTG
GGGCGGCTGG CGGCCTGTTT CATGGAATCG CTGGCCACGC TGGGCTGCCC GGCCTATGGC
TACGGCATCC GCTATGAGCA CGGGCTGTTT CGCCAGAGCT TTGCCGAGGG CCGGCAGATG
GAGGCGCCCG AGGACTGGCT CGCGCAGCCC TATGTCTGGC AGTTCGAGCG CCCCGAGGCG
CGTTTTACCC TGGGTTTCGG CGGCCGCGTC GTCACCCGCG ACGGCAAGCC GGTCTGGGAG
CCCGAGAACT TCGTGCAATC CGAAGCCTAT GACGTCCCGG TCATCGGCTG GCAGGGAGCC
TGGGCCAACA CGCTGCGGCT CTGGGCCGGG CGGGCGGTCG ACCCCTTCGA CCTCGGCCGC
TTCAACGCCG GCGACTTTAC GGCGGCCGCC GAGGCCGAGG CGCTGGCCCG CACCATCTCG
CGCGTGCTTT ATCCCGAGGA TTCGACCGAA GCCGGCAAGC GGCTGCGGCT GACGCAGGAA
TATTTCTTCT CGGCCGCCTC GATTCGCGAC ATCCTGCGCC GGTTCGAGGC CGATCACGCC
GACCTCCGCC TCTTGCCGCA AAAGGTGGCG ATCCAGCTCA ACGACACCCA TCCGGCCATC
GCCGGGCCGG AATTGCTGCG CATCCTGCAT GACGAGCGCG GCCTTCCCTT CGACGAGGCG
CTGGCGATCA CCCGGGCCTG CGTGAACTAC ACCAACCACA CGCTCTTGCC CGAGGCGCTG
GAAAGCTGGG GCGAGGGGCT TTTCGGCGAG TTGCTGCCGC GCCATCTGCA GATCATCGAC
CGCATCGATG CCGAGGACGC CAAGGCCCAT CCCGACCGCC GGAACGCGGC GCGGGGCGAG
GGGCGGGTCA GGATGGGCGA GTTGTCCTTC ATCCTGTCGA ACCGCGTCAA CGGCGTCTCG
GCGCTTCATA CCGGGCTGAT GAAGACCACG GTTTTCGCCG ACCAGCATCG CATCTGGCCC
GATCGCATCG TGAACCAGAC CAACGGCGTC ACCCCGCGCC GCTGGCTGCA TGGTTGCAAC
CCGCGCCTGT CGCGGCTGAT CACCCAGACC ATCGGCGACG GCTGGGTGGG CGATCTGGAG
CAGTTGCAGG CGCTGGAGCC CCATGCCGCC GATGCCGGCT GGCTGGAGCA GTTCGCCGCC
GTGAAGGCCG CGAACAAGGC CGATCTGAGC GACTGGGCCC GCCGCGAACA TGGCCTGACG
CTGAATCCGC AGGCGCTGTT CGACGTGCAG ATCAAACGCA TCCACGAATA CAAGCGCCAG
CACCTGAACA TCCTGGAGGC CATCGCGCTG TGGCAGGAGA TGCGCGAGAA CCCGTCCGCC
GACTGGACGG CGCGGGTCAA GATCTTTGGC GGCAAGGCGG CGCCGGGCTA TTTCTTCGCC
AAGGACATCA TCCGGCTGAT CAACGACGTG GCGGGCGTCA TCAATGCCGA CGCGGCGACG
AACGAAAAGC TGCAGGTCGT CTATCTGCCG AATTACAACG TGACGCTGGC CGAGCGGCTG
ATCCCCGCCG CCGATCTGTC CGAGCAGATC TCGACGGCCG GCAAGGAGGC GTCGGGCACC
GGTAACATGA AGTTCGCGCT GAACGGCGCG CCGACCATCG GCACGCTGGA CGGTGCCAAT
GTCGAGATCC GCGAACTGGT GGGGCCCGAG AACTTCTTCC TGTTCGGCCT GACCGCCGAG
GAGGCCGAGG CCCGTCGCGC CGTTCCCGAC CATGCCGCCA GGGCGGTCGC CGGCGATCCG
CGGCTCAAGC GCGCCATCGA GGCGATCCGC AGCGGCATCT TCAGCCCAGG CGAGCCGGAC
CGCTATGCGA ATATCGTCGA GAACCTGACG GGGGCGGATT ACTTCCTCGT CGCCTCGGAT
TTCGCCGATT ACTGGCGGGC GCAGCGCGAG GTCGATTTCG CCTATGCCGA CCGCGACGGC
TGGGCGCGGA TGGCGGCGCT GAACGTGGCG CGCTCGGGCT GGTTCTCGTC GGATCGCACG
ATCCGCGGCT ACATGCAGGA CATCTGGAAC GCGAAAAGCC TGCTCGGGCA GGAGTGA
|
|---|
| Protein sequence | MAKDEMPKSD FRDAILWHLT YTLGKDPDHA QVFDWRLALS HAVRDRIVDR WMASTRATYR
ADAKRVYYLS MEFLIGRLLQ DNIVNLQLAD QAQAAIESFG LDYRDLLLDE PDAALGNGGL
GRLAACFMES LATLGCPAYG YGIRYEHGLF RQSFAEGRQM EAPEDWLAQP YVWQFERPEA
RFTLGFGGRV VTRDGKPVWE PENFVQSEAY DVPVIGWQGA WANTLRLWAG RAVDPFDLGR
FNAGDFTAAA EAEALARTIS RVLYPEDSTE AGKRLRLTQE YFFSAASIRD ILRRFEADHA
DLRLLPQKVA IQLNDTHPAI AGPELLRILH DERGLPFDEA LAITRACVNY TNHTLLPEAL
ESWGEGLFGE LLPRHLQIID RIDAEDAKAH PDRRNAARGE GRVRMGELSF ILSNRVNGVS
ALHTGLMKTT VFADQHRIWP DRIVNQTNGV TPRRWLHGCN PRLSRLITQT IGDGWVGDLE
QLQALEPHAA DAGWLEQFAA VKAANKADLS DWARREHGLT LNPQALFDVQ IKRIHEYKRQ
HLNILEAIAL WQEMRENPSA DWTARVKIFG GKAAPGYFFA KDIIRLINDV AGVINADAAT
NEKLQVVYLP NYNVTLAERL IPAADLSEQI STAGKEASGT GNMKFALNGA PTIGTLDGAN
VEIRELVGPE NFFLFGLTAE EAEARRAVPD HAARAVAGDP RLKRAIEAIR SGIFSPGEPD
RYANIVENLT GADYFLVASD FADYWRAQRE VDFAYADRDG WARMAALNVA RSGWFSSDRT
IRGYMQDIWN AKSLLGQE
|
|---|
| |