Gene Pden_4415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4415 
Symbol 
ID4582965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1616178 
End bp1616819 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content68% 
IMG OID639771722 
ProductXRE family transcriptional regulator 
Protein accessionYP_918175 
Protein GI119387120 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAACT GGCGCGCAAT CCCCGGCCCT GATACCCTCT CGCAAAACGG CATCGGGGCA 
AGGATGAGCG ATTTCGACGT GGGCGCGCGG CTGAAAGAGC TGCGCAGCGC GGCAAACATG
TCGCAGCGGC AGCTGGCCGA GGCTTCGGGC GTGCCGCATG GCCAGGTCTC GATGATCGAG
ACCGGGCGCT CCAGCCCCTC GGTCGCCTCG CTGCGCAAGA TCCTTGGCGG GCTGGGCGTC
ACCATGTCCG AGTTCTTCGA GCCGGACCTG CCGCAAAGCC CGCAGCCCTT CTTTACCCCG
GCCGAACTGC GCGACCTGAC CTCGCGGCTT TATTCCGCGG CGCAGGGGCC GGTCGGCCGC
ATGACCCTGC GCCAGGTCGG CGATGCGCGG CTGCACAACC TGCAGATCCT GCACGAACGC
TATGAGCCGG GCGCCGATAC CGGCGAGACC ATGCTGGCCC ATCACGGCAG CGAGGGCGGC
ATCGTCGTCG CCGGCGAGAT CGAGCTGACC GTGGCCGACC AGACCCGGGT GCTGAAGGCG
GGGGACAGCT ATCTGTTCGC CTCGACCCAG CCGCATCGCT TTCGCAATGT CTCGGATCGC
GAGGCGGTGG TCGTCAGCGC CTGCACCCCG CCCTATCTCT AG
 
Protein sequence
MRNWRAIPGP DTLSQNGIGA RMSDFDVGAR LKELRSAANM SQRQLAEASG VPHGQVSMIE 
TGRSSPSVAS LRKILGGLGV TMSEFFEPDL PQSPQPFFTP AELRDLTSRL YSAAQGPVGR
MTLRQVGDAR LHNLQILHER YEPGADTGET MLAHHGSEGG IVVAGEIELT VADQTRVLKA
GDSYLFASTQ PHRFRNVSDR EAVVVSACTP PYL