Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4415 |
Symbol | |
ID | 4582965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 1616178 |
End bp | 1616819 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639771722 |
Product | XRE family transcriptional regulator |
Protein accession | YP_918175 |
Protein GI | 119387120 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGAACT GGCGCGCAAT CCCCGGCCCT GATACCCTCT CGCAAAACGG CATCGGGGCA AGGATGAGCG ATTTCGACGT GGGCGCGCGG CTGAAAGAGC TGCGCAGCGC GGCAAACATG TCGCAGCGGC AGCTGGCCGA GGCTTCGGGC GTGCCGCATG GCCAGGTCTC GATGATCGAG ACCGGGCGCT CCAGCCCCTC GGTCGCCTCG CTGCGCAAGA TCCTTGGCGG GCTGGGCGTC ACCATGTCCG AGTTCTTCGA GCCGGACCTG CCGCAAAGCC CGCAGCCCTT CTTTACCCCG GCCGAACTGC GCGACCTGAC CTCGCGGCTT TATTCCGCGG CGCAGGGGCC GGTCGGCCGC ATGACCCTGC GCCAGGTCGG CGATGCGCGG CTGCACAACC TGCAGATCCT GCACGAACGC TATGAGCCGG GCGCCGATAC CGGCGAGACC ATGCTGGCCC ATCACGGCAG CGAGGGCGGC ATCGTCGTCG CCGGCGAGAT CGAGCTGACC GTGGCCGACC AGACCCGGGT GCTGAAGGCG GGGGACAGCT ATCTGTTCGC CTCGACCCAG CCGCATCGCT TTCGCAATGT CTCGGATCGC GAGGCGGTGG TCGTCAGCGC CTGCACCCCG CCCTATCTCT AG
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Protein sequence | MRNWRAIPGP DTLSQNGIGA RMSDFDVGAR LKELRSAANM SQRQLAEASG VPHGQVSMIE TGRSSPSVAS LRKILGGLGV TMSEFFEPDL PQSPQPFFTP AELRDLTSRL YSAAQGPVGR MTLRQVGDAR LHNLQILHER YEPGADTGET MLAHHGSEGG IVVAGEIELT VADQTRVLKA GDSYLFASTQ PHRFRNVSDR EAVVVSACTP PYL
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