Gene Pden_4384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4384 
Symbol 
ID4582934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1577802 
End bp1578797 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content73% 
IMG OID639771691 
Producttransport system permease protein 
Protein accessionYP_918144 
Protein GI119387089 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.122979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC CGCGCTATCC GCTGCTGATC GCCGCGCTGT CGCTGCTGGT GGCTGCGCTG 
TTCCTGGCCT CGCTGCTGAC CGGACCGGCG GGAATCGGCC CGGGCGAAAG CCTCGCCGCG
CTGTTTCGCG GCGACGACCT GCTGGCGCTG GTGATGCGCG AATTGCGCCT GCCGCGCGCC
ATCCTGGGCT TTCTGGTCGG TGCGGCGCTG GGGATGGCAG GCGCGGTGCT GCAAGGCTTC
CTGCGCAACC CGCTGGCCGA GCCGGGGCTG ATCGGCACCA GCGCCTCGGC GGCGCTGGGG
GCGGTGCTGG CGATCCAGAC CGGGCTTTCG GCCACGTTCC CGCTGGCTTT GCCCCTGGCG
GCGCTGGCCG GCGCGGCGCT GTCGGTGCTG CTGGTGCTGA TGCTGGCCGG GCCGCGCGGG
GGCGCACTGG CGCTGATCCT GGCCGGCATC GCCATTTCCG CGCTGGCAGG CGCGGCCACC
TCCCTGGTGC TGAACCTTTC GCCCAACCCC TTTGCCATCA ACGAGATCGT GTTCTGGATG
ATGGGTTCGC TGGCGGATCG CTCGATGCTG CATGTCTGGA TCGCGGCGCC CTTCATGCTG
CTGGGCTTTG CGCTGCTCTG GCCCACCCGC CGCGCGCTCG AGGCGCTGAC GCTGGGCGAG
GATGCGGCGG CCTCCAGCGG CGTGCATCTG GGCCGGCTGC GGCTGATGCT GGTCGCGGGC
ATCGCCGCGC TGATCGGCGG CGCCACGGCG GTGGCCGGCA CGGTGGGCTT CGTCGGGCTG
GTGGTGCCGC ATGTGCTGCG CCGCGCGGTC GGCGCCAGCC CGGCGCGGCT GGTCCCGGCC
GCGGCGCTGG GGGGCGCGGC GGTCGTTCTG GCCGCCGACA TCGCCGTGCG GCGGATCGCG
CCGGGCCATG ACCTCAAGCT TGGTGTGCTG ACGGCGCTGG TGGGGGCGCC CTTCTTCCTG
CACCTGATCC TCAGGACCCG GCGCGAGGGG CTGTGA
 
Protein sequence
MTAPRYPLLI AALSLLVAAL FLASLLTGPA GIGPGESLAA LFRGDDLLAL VMRELRLPRA 
ILGFLVGAAL GMAGAVLQGF LRNPLAEPGL IGTSASAALG AVLAIQTGLS ATFPLALPLA
ALAGAALSVL LVLMLAGPRG GALALILAGI AISALAGAAT SLVLNLSPNP FAINEIVFWM
MGSLADRSML HVWIAAPFML LGFALLWPTR RALEALTLGE DAAASSGVHL GRLRLMLVAG
IAALIGGATA VAGTVGFVGL VVPHVLRRAV GASPARLVPA AALGGAAVVL AADIAVRRIA
PGHDLKLGVL TALVGAPFFL HLILRTRREG L