| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4373 |
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| Symbol | |
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| ID | 4582923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1563763 |
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| End bp | 1566018 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639771680 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_918133 |
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| Protein GI | 119387078 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA CCCATCCCAA ACCGCCTGCC TCGGCGTCGG CCGCGCAATT GCTGCCGACC
CTGGGCCTGC TTCCTGTGCT GGCCATCTCG GCCGGCGTAG CCGGCCCCGC CCAGGCGCAG
GATACCGTAA CCCTGGACAC GGTGGTCATC CGCCGCCAGC AGGGCAACGA GGCCGAGACC
AGCTACAAGG TCACCGAAAG CACCTCGGAC AAGGCCACCG CGCCGTTGCT CGATACACCA
AGAACAGTGA CCGTCGTTAC CGGGCGCCAG ATCGAAGAGC GCGGCCAGAC CTCGGTCGCG
GACGTGCTGC GCACCACGCC GGGCGTCACC CTGGGCGCAG GCGAAGGCGG CGTGCCGCAG
GGCGTGCGCC CCTATATCCG CGGCTTCGAG GCCAGCCAGG ACATGCTGGT CGACGGCATG
CGCAACGCCT CGCGCACGCA ATACGAGGCC TTCAACCTGG AATCCATCGA GATCAGCAAG
GGCCCGGGCG GGGTCTATTC CGGTGCCGGC TCGACCGGCG GCACCATCAG CCTGAACAGC
AAGATCCCGC AGCCGGGCGC CTTTGACGAG GTGGCGCTGT CCTACGGCAC CGGCAATTAT
GTCCGCGGCA CGCTGGATTC GAACCGCGAA TTCGGCGCGA TCGGCCTTCG CCTGAACCTG
ATGGCGCAGC GCGCCGACGA CCTGGGCGGG CGCGACGGCG TCGAGTCCAG GCGGGTCGGC
GTGGCGCCCA GCTTCAGCTA TCGCCTGACC GATGACAGCA AGATCACCGC CGGGCTCTAT
TACTACAAGG ACGAGGATAC GCCCGATTAC GGCGTGCCGA TGTCCAATGC CACCACGCCG
GCCGCATGGC GGCGCGGCTC GGGCACCCGC ATCGACCCGT TCCTGCCGGT CGATGTCGAT
CCCGACACCT TCTACGGCCT GCACGCGCGC GATTTCCGCG ACATCGAATC CGCCTCGGGC
TATGTAAGGT TCGCGCATGC CTTCTCGGAC AGCCTGCGGC TGACCACGGC GCTGCGCAAG
GCACGCGACA CCAACACCTA TGTCGTGACC TCGCCGACCT CGGGCAGCGA TGGCCTGGTG
TCGCGCAGTT CCAAGGCTTC GGATCGGGTG AACGAGACGG TGTCGTTCAA CGCCCAGCTT
TCGGGCGAGG CACGGGCCTG GGGCGTCGAG CACAGCTTCG CGGTCGGCGT GGACATCGCC
AATTCGCGTG CCACCAACCG CCGGCTGACG GTGACCAATC CCGACCCGAT GCCGACCTCG
CCCTATGAGA ATCCGAACCC CGGCGCGCCC TGGGGCGGCA GCATCGAGCG CGGCGGCGAG
AGCGGCTACA GCACCACCAG GTCGCGTGGC GTCTATGCGC TGGATACCAT CACCTTCACC
CCGCAATGGG AGGCGACGGT GGGGCTGCGC TGGGACGATT ACAGCGTCGA CAGCATCACC
CATGCGACCG ACACCACCCC GCGCGAAAGC CACGGCAACG ATTCCGATTT CCTGAACGGG
ATTCTGGGCG TGGTCTACAA GCCGGTGCAG AACGGCTCGA TCTATGCCTC GGCCAGCACC
TCCTCGAACC CGGCGGGCGA GGGCGCGGGC ACCGGCGGCA GCAATGCCTC GGACGATCTG
GACAGCCTCG ACCCCGAGCG CAGCGTGAAC TACGAGATCG GCACGAAATG GCTGGTGCTG
AACGACCAGC TCGAGCTGAG CGCGGCGCTG TTCAGGACCG AAAAGGACAA TGCCCGCGTC
ACCAACGCCC TGGGCGAGAC CGAGAATATC GGCAACACCA CCGCCAAGGG CATCGAGCTG
GGCTTTGCCG GCCAGGTCGC CGAGCGCTGG GGCATCTGGG GCGGTTATGT CCATCAGGAC
GTCAAGCTGA AGGACGGCGG CTGGAGCACC CCGCGCGGCG GCGGCGAGCC CTATCCGAAC
CCCGCCACCG GCAAGCAGGT CGCGAAGGTT CCGCGCAACA GCTTTTCGCT GTGGACGACC
TACGACTACA GCCCGCAACT GACGCTGGGC GGCGGCGTGA CCTATACCGG CAAGCGCACG
GCCAGCTATT CGCAGAACGG CGATGCCGAT GCCGCCCTGC CGTCGAGCTG GCGCACCGAC
CTGATGGCGG CCTACAGGCT GACCGAGGCC ACGGCGCTGC AACTCAACGT CAACAACGTC
TTCGACCGCC AGATCTATAC CGACTCGCAT GTCTCGCAAT TCGCCAATAT CGAGCCGGGC
CGGAACTTCG TGCTGACGCT GAAGCACGCG TTCTGA
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| Protein sequence | MNKTHPKPPA SASAAQLLPT LGLLPVLAIS AGVAGPAQAQ DTVTLDTVVI RRQQGNEAET
SYKVTESTSD KATAPLLDTP RTVTVVTGRQ IEERGQTSVA DVLRTTPGVT LGAGEGGVPQ
GVRPYIRGFE ASQDMLVDGM RNASRTQYEA FNLESIEISK GPGGVYSGAG STGGTISLNS
KIPQPGAFDE VALSYGTGNY VRGTLDSNRE FGAIGLRLNL MAQRADDLGG RDGVESRRVG
VAPSFSYRLT DDSKITAGLY YYKDEDTPDY GVPMSNATTP AAWRRGSGTR IDPFLPVDVD
PDTFYGLHAR DFRDIESASG YVRFAHAFSD SLRLTTALRK ARDTNTYVVT SPTSGSDGLV
SRSSKASDRV NETVSFNAQL SGEARAWGVE HSFAVGVDIA NSRATNRRLT VTNPDPMPTS
PYENPNPGAP WGGSIERGGE SGYSTTRSRG VYALDTITFT PQWEATVGLR WDDYSVDSIT
HATDTTPRES HGNDSDFLNG ILGVVYKPVQ NGSIYASAST SSNPAGEGAG TGGSNASDDL
DSLDPERSVN YEIGTKWLVL NDQLELSAAL FRTEKDNARV TNALGETENI GNTTAKGIEL
GFAGQVAERW GIWGGYVHQD VKLKDGGWST PRGGGEPYPN PATGKQVAKV PRNSFSLWTT
YDYSPQLTLG GGVTYTGKRT ASYSQNGDAD AALPSSWRTD LMAAYRLTEA TALQLNVNNV
FDRQIYTDSH VSQFANIEPG RNFVLTLKHA F
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