| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4369 |
|---|
| Symbol | |
|---|
| ID | 4582919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1560541 |
|---|
| End bp | 1561515 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639771676 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_918129 |
|---|
| Protein GI | 119387074 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCTGA ATCGACGTTC AATCCATCGC ATTATATTTG CCATATCGTT CGATTTTACT
TATGAGTCTG GCATGACGCT GGAACAGCTC CGCATCTTCC TTGCCGTGGC CGAGCGGCAG
CATGTCACCC GCGCGGCCGA GGCGCTGAAC CTGACGCAAT CGGCGGTCAG CGCCGCCGTC
TCGGCTTTGG AGGCGCGGCA TGGTGTGCGC TTTTTCGACC GGGTGGGGCG GCGGATCGTG
CTGACCGAGA CGGGCGAGGC CTTCATGGCC GAGGCGCGCG CCGTGCTGGA CCGGGTCGAG
ACCGCCGAGA TGGTGCTGGA GGATCTGTCG CGCGAGCCGC GGGGCCGGCT GCGGGTCCAT
GCCAGCCAGA CCGTCGCCAG CTATTGGCTG CCGCCGCGGC TGGTGGCGCT GCGCGAGATG
CATCCGGGGA TCGAACTGCG CCTGACGGTC AGCAACACCA CCCATGCCGC GGATGCCGTG
CAGGACGGCG GTGCCGACCT GGGGTTGGTC GAGGGTGCGG TGGCGCATGG CGGGCTGCAC
CGGCAGGTGG TGGCCCGCGA CCGGCTGGTG CTGGTCATGG CGACCGATCA CCCCTGGGCC
GGGGTCGAGG CGATGCCCCA GGCCGGGCTG GAGGCGCAGA ACTGGATCCT GCGCGAGCCG
GGCTCGGGCA CGCGCTCGGA ATTCGAGACC TGGCTTGCCG GGCGGGGGCT TTCCATTGCC
GCGCTGCCCT TGTCGCTGGA GCTGCCCTCG AACGAGGCGG TTCTGAACGC GGTCGCCGCC
AGCCAATGCC TCGCGGCGCT GTCGCAACGG GCGGTGGCGC GGCCGGCCGC TGCGGGTTGG
ATCCGCACCC TGCCGCTGCC GGGGGCGGAG CGGCCGTTTT CGCTGCTGAC CAATCCGCGG
CGCTATCGCA CGCGGGCGGT GCAGGCGCTG ATCGACATCC TGACGGACGA GGGTTTCGCC
GCAGGCACCC CCTGA
|
|---|
| Protein sequence | MVLNRRSIHR IIFAISFDFT YESGMTLEQL RIFLAVAERQ HVTRAAEALN LTQSAVSAAV
SALEARHGVR FFDRVGRRIV LTETGEAFMA EARAVLDRVE TAEMVLEDLS REPRGRLRVH
ASQTVASYWL PPRLVALREM HPGIELRLTV SNTTHAADAV QDGGADLGLV EGAVAHGGLH
RQVVARDRLV LVMATDHPWA GVEAMPQAGL EAQNWILREP GSGTRSEFET WLAGRGLSIA
ALPLSLELPS NEAVLNAVAA SQCLAALSQR AVARPAAAGW IRTLPLPGAE RPFSLLTNPR
RYRTRAVQAL IDILTDEGFA AGTP
|
|---|
| |