Gene Pden_4362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4362 
Symbol 
ID4582912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1551496 
End bp1552545 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content71% 
IMG OID639771669 
Productglycosyl transferase, group 1 
Protein accessionYP_918122 
Protein GI119387067 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAC CTTGCGACGC GGCCTTTGCC ATTCCGGGCG ACATCGCCAC GCTGACCGGC 
GGCTATATCT ACGAACGCCG CCTGCTGGAG GGTTTGCGCG ACCTGGGCCA CGACATGCGG
CACCTGCAAT TGGTCGCGAG CTTTCCCGAC CCGACCCCCG CCGAAATGGC GGCGGCTGTG
GCGGCGCTGG TGGCCGAGGA TCGCCCCCTG ATCGTGGACG GGCTGGTCTT CGGCGCCATC
GACACGGCCG GCCTCGCCCG GGTCCGCGCG CCCATCGTGG CGATGATCCA TCATCCGCTG
GCGATGGAGA CCGGCCTTAA TCCGGCGCGG CGCGCGCATC TTTACCGGAC CGAGCGCGAC
AACCTGCAAC TGGCGCGCCA TGTGCTGGTC CCAAGCCCGC ATGCCCGCGC CATGTTGACC
GAACGCTACG GCGTGTCCGC CGACCGCATC ACCATCGCCC GTCCGGGGGT CGAGCCGGCC
CGGCTCGCAC CCTCGCCCGT CACCCCGCCG CTGATCCTGT CGGTGGGCAT CCTGCATCCG
CGCAAGGGCC ATGACATGCT GATCAATGCC CTGGCGGGAC TGGCCGACCT GGACTGGCAG
GCGGTGATCG TCGGCAACCC GTGGGACGGG GCCCATGCCG CGGCACTCGC CCGGCAATTG
GCCGGCAGCC CGGTCTCGGG GCGGGTGACA TTGGCGGGGC GGGTCGATGC CGACCGGCTG
GAGCGGCTTT ATGCCAGCGC CTCGATCTTT GCCCTGGCGA CTCGATACGA GGGCCACGGC
CTGGTTTTCG ACGAGGCGCT GGCGCATGGC CTGCCGATCG TCAGTTGCGC GACGGGCGCG
GTTCCCGACA CCGTGCCCGC TGCCACGGGG CTTCTGGTGC CGCCCGATGA TCCGCATGCC
CTCGCGGCCG CGCTGCGCCG GTTGCTGGGC GACGGACCCT TGCATGCGCG GATGCGCGAC
GCCGCGCGAC GGGCCGGCAA CGCCCTGCCC GGCTGGCAGG AAACCGCAGC CATCGCCAGC
CGCGTTCTGG AACGCTTGAG CCTGTCGTGA
 
Protein sequence
MTRPCDAAFA IPGDIATLTG GYIYERRLLE GLRDLGHDMR HLQLVASFPD PTPAEMAAAV 
AALVAEDRPL IVDGLVFGAI DTAGLARVRA PIVAMIHHPL AMETGLNPAR RAHLYRTERD
NLQLARHVLV PSPHARAMLT ERYGVSADRI TIARPGVEPA RLAPSPVTPP LILSVGILHP
RKGHDMLINA LAGLADLDWQ AVIVGNPWDG AHAAALARQL AGSPVSGRVT LAGRVDADRL
ERLYASASIF ALATRYEGHG LVFDEALAHG LPIVSCATGA VPDTVPAATG LLVPPDDPHA
LAAALRRLLG DGPLHARMRD AARRAGNALP GWQETAAIAS RVLERLSLS