Gene Pden_4360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4360 
Symbol 
ID4582910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1549185 
End bp1549958 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content76% 
IMG OID639771667 
ProductABC transporter related 
Protein accessionYP_918120 
Protein GI119387065 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACG GCGATCGCGC CGGGATCGCC TGCCGGGCGC TGTCGAAATC CTGGCCCGGC 
GGCGTGCAGG CGGTCGCGGT TTTCGACGCC GATTTCGACG CCGGCCGGAC CACCGCGCTG
ATCGGCCCCT CGGGCTGCGG CAAGTCCACG CTGCTGCGGC TGATCGCGGG GCTGGAACAG
CCGGACGACG GGCAGGTGCG GATCGGCGGG CTGGACCCGG CCCGCCAGCG CCGGCAGGGC
ACGATCTCGG TCGCGTTCCA GGACCCCTCG CTGCTGCCCT GGCTCAGCGC CGCGCAGAAC
GTGGCGCTGG CGCGCAAGCT CGCCCGCCAG CCCGCCGATC CGGGCAAGTT GGCGCATCTG
CTGCGGCTGG TCGGGCTGGA GGGCTTTGCA GCGACGCGCC CGGCGGCGCT GTCGGGCGGC
ATGCGCCAGC GCGCCGCCAT CGCCCGCGCG CTGGTCACCG CGCCGCAGGT CCTGCTGCTG
GACGAGCCCT TCGGCGCGGT CGACGAACTG ACCCGCCGCC AGCTTGCGCA GGACCTGCCG
CCGCTGTGGC AGACGCAGGG CACGACGGCG CTGCTGGTGA CCCATTCGCT GGCCGAGGCG
GTGCTGCTGG CCGACCGCAT CCTGGTCCTG TCGCCGCGCC CGGCGCGGAT CGTCGCCGAC
ATCGCCGTGC CCCTGCCCCA TCCGCGCAGG CCCGACCTGA CCGACAGCCC CGCCTTTCGC
CGCATCGAGG CCCAGGCGCG GGCGGCGCTC TCCCTGCCCG CCGGCGCGAC ATGA
 
Protein sequence
MPDGDRAGIA CRALSKSWPG GVQAVAVFDA DFDAGRTTAL IGPSGCGKST LLRLIAGLEQ 
PDDGQVRIGG LDPARQRRQG TISVAFQDPS LLPWLSAAQN VALARKLARQ PADPGKLAHL
LRLVGLEGFA ATRPAALSGG MRQRAAIARA LVTAPQVLLL DEPFGAVDEL TRRQLAQDLP
PLWQTQGTTA LLVTHSLAEA VLLADRILVL SPRPARIVAD IAVPLPHPRR PDLTDSPAFR
RIEAQARAAL SLPAGAT