| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4354 |
|---|
| Symbol | |
|---|
| ID | 4582904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1543296 |
|---|
| End bp | 1544039 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639771661 |
|---|
| Product | N-carbamoylsarcosine amidase |
|---|
| Protein accession | YP_918114 |
|---|
| Protein GI | 119387059 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACGAG GAAGCACGAG AATGAGCGAA GTTGACACCA AGGAACTGGA CCGCCTGCTG
CAAGAGGCCT TCGACACCGC GACGCGGCTT TACCAGGAGC GCGGTTTTCA GCGCCGCGTA
GGCTTTGGCA AGCGCCCGGC CCTGGTCAGT GTCGATCTGG CGAATGCCTG GACCCGTCCC
GGCAACCCCT TTACCTGCGA TCAGGAAAAG ATGGACGGCG AGATCATCCC CGGCATGCAG
AAGCTGTTGA CGGCCTTTCG TGCCGCCGGC CTGCCGGTGG TCCATGTCAC CACCGCCTAC
GAGATCACCG ACCGCAGCGC CGATTTCACC GATATGGGCC TGTGGCACAA CAAGATCCCG
GTCGACGTGG TGGATCTCAA GGACAAGGAG CTTTGGGCCA TCGACAGCCG CATCGCCCCG
GTCGAGGGCG AATACACGCT GCTGAAGAAG CGCGCCTCGT CCTTTCACGG CACCGAGCTG
GCCGGCATCC TGCGGGCGAA CAACGTGGAC ACGATCCTGG TGACCGGCGT CACCGCCTGT
GCCTGCGTGC GCCAGACCAT CTGCGACGGC ATCGCGGACG GTTTCCGCAC CATCGCGGTC
CGGGAATGCA TCGGCGACCG CGTGCCGGGC GCCGTGGCCT GGAACCTCTT CGACATCGAC
GCGAAGTTCG GCGACGTGCA CAGTGTCGAC GAATGCGTCG CCTATATCGA TGGCCTTGCG
GCGCAGCGGA TCGCCGCCGA GTAA
|
|---|
| Protein sequence | MIRGSTRMSE VDTKELDRLL QEAFDTATRL YQERGFQRRV GFGKRPALVS VDLANAWTRP
GNPFTCDQEK MDGEIIPGMQ KLLTAFRAAG LPVVHVTTAY EITDRSADFT DMGLWHNKIP
VDVVDLKDKE LWAIDSRIAP VEGEYTLLKK RASSFHGTEL AGILRANNVD TILVTGVTAC
ACVRQTICDG IADGFRTIAV RECIGDRVPG AVAWNLFDID AKFGDVHSVD ECVAYIDGLA
AQRIAAE
|
|---|
| |