Gene Pden_4347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4347 
Symbol 
ID4582897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1532148 
End bp1533389 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content68% 
IMG OID639771654 
Productradical SAM domain-containing protein 
Protein accessionYP_918107 
Protein GI119387052 
COG category[R] General function prediction only 
COG ID[COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.619101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGCC GCGAAGCGAA ATCTCTGGAC CTGATCGTCA AGGTGGCCGA GCGCTGCAAC 
ATTGCCTGCA CCTATTGCTA TTTCTTTTTC GGCGGCGATG AGAGTCACAA GTTCCATCCG
CCCTATGTCA ACGAGGAAAC CGCCGCCGAA ATCGAAGCCT TCCTGGACCG CATCACCGCC
GACGGCGCGG TCGAGAACCT GATGATCTAT TTCCACGGCG GCGAGCCGAT GATGGCGCCC
AAGCCGGTGA TCGCCCGCAT CGCCCGCGCC GCCCGCCGCC TGTCCGAAAG CGGCCGGGTG
GCCGATCTGG GCCTGTCGAT GCAGACCAAC GGCATGCTGG TCAACGACGC CTGGATCCGC
TTTTGCGCGG ATCTGGGGAT CGGCGTCGGC GTCAGCCTGG ACGGCAACGA GGCGGCGAAC
GACCGCTTTC GCATCGACAA GAAGGGGCGC GGCACCTATC GCCGCGCGGT GCAGGGCTTT
CGCCGCCTCG CGGGCGAGAA CGGGGCCGGC ATCGACCTGC ATCCCGGCCT GCTGAGCGTG
ATCGACCCCG AGGGCGACGG CGCCCGGCGC CTGGAGCATT TCTCGGGCGA GATCGGCGCG
CAGCGGATGA ACTTCCTGCA TCCCGACGGC GGCCACGACC AGGGCATCGC GCCGGCACAG
GTGGCCGGGG TCGAGAATTT CATGCTCGGC GTGTTCCGCG CCTGGGTGCG GCGGCGCGAC
AGCGGGCTGC GCGTGCGCTT CATCAAGGAT CTGCTCGACA CCCTGCTCAG CGACGAGGGG
GCGCGTACTT GCCCGGATTC GGCACGCAGA CTTTCGCGCA TCCTGACGAT TTCCTCGAAC
GGGATGCTGG GCGCCGAGGA TACCGCGCGC ACGCTGGACG CACGTTTCCG CGATATCGGC
CATGTGCGCG ATTTCGACAG CGTGGCGCAG ATCTTCGCGA CGCCGGCACT GGTTGAGATG
CAGCAGGCCG CCGCCACGCC GCCGGCCGCC TGCGCCGCCT GCCCATGGTG GGGCACCTGC
CGGGGCGGCA CCTTCACCAA CCGCTATTCG GCGCAGAACG GCTTCGACAA TCCCAGCGTC
TATTGCGATG CGCTCAAGGC GTTCTTCGAA GAGGTCTCCG CCTGGCTGGT GCGCGGCGGC
ATCCCGGTCG AGGATATCGA GCGGCGGCTG ATCCTGGCCG GCTCGGCCCC CGAGGCGGTC
CTGGGCGCCG CGCGGGCAGA ACCCGAGCCC CTGCGCGCCT GA
 
Protein sequence
MESREAKSLD LIVKVAERCN IACTYCYFFF GGDESHKFHP PYVNEETAAE IEAFLDRITA 
DGAVENLMIY FHGGEPMMAP KPVIARIARA ARRLSESGRV ADLGLSMQTN GMLVNDAWIR
FCADLGIGVG VSLDGNEAAN DRFRIDKKGR GTYRRAVQGF RRLAGENGAG IDLHPGLLSV
IDPEGDGARR LEHFSGEIGA QRMNFLHPDG GHDQGIAPAQ VAGVENFMLG VFRAWVRRRD
SGLRVRFIKD LLDTLLSDEG ARTCPDSARR LSRILTISSN GMLGAEDTAR TLDARFRDIG
HVRDFDSVAQ IFATPALVEM QQAAATPPAA CAACPWWGTC RGGTFTNRYS AQNGFDNPSV
YCDALKAFFE EVSAWLVRGG IPVEDIERRL ILAGSAPEAV LGAARAEPEP LRA