| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4334 |
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| Symbol | |
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| ID | 4582884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1513676 |
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| End bp | 1515139 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639771641 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_918094 |
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| Protein GI | 119387039 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.313346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG CAACAGGGAC CAGGACGGAA CCGGAGCAGC ACACGCTCAA GCGGGTCATC
GGACCCAAGC TGCTTTTGCT TTTCATCGTG GGCGACATTC TCGGCACCGG GGTCTATGCC
CTGACCGGCA CCGTGGCGGG CGAGGTGGGC GGCGCGGCCT GGGCGCCGTT CCTGGTCGCC
TTTCTCGTCG CCACCATCAC CGCGCTGTCC TATCTGGAAC TGGTCACGCG CTATCCGCAG
GCGGCGGGTG CGGCGCTTTA TGCCCATCGC GCCTTCGGCA TCCATTTCCT GACCTTCCTC
GTGGCCTTCA CCGTCATGTG CTCGGGGATC ACTTCGGCCT CGACGGCGTC GAACGCCTTC
GCGGGCTTCA TGAACGACGG CTTCGGCCTG GGCTTTCGCA AGGACGGCAG CGGCATCCTG
ATCATCGCGC TGGGGTTCAT GGCGCTGGTC GCCGCGATCA ACTTCCGCGG CGTCGGCGAA
AGCGTCAAGG CCAACGTGGT GCTGACCTGC GTCGAGCTTT CGGGCCTGCT GATGATCATC
TTCATCGGCT TTTACGCCAT GGGCCAGGGC CGGGCGGATT TCAGCGAGGT TATGATCTTC
CGCTCGCCCG ACGAAAAGGG CGCCTTCCTG GCGCTGACGG CCGCGACGGC GCTGGCCTTC
TTCGCCATGG TCGGTTTCGA GGATTCGGTG AACATGGCCG AGGAGGTCAC GGACCCGGTC
CGCATCTTTC CCCGCATCAT GCTGACCGGG CTGGGCATTA CCGGGGTGAT CTATGTGCTG
GTGGCGATCT GCGCCGTGGC GCTGGTGCCG GTGGGCGACC TGTCGGACCC CGACAAGGGC
TCGGCGCTGA CGCAGGTGGT GCGGGCGGGG GCGCCGAACT TCCCCTTCGA CAAGATCTTT
CCCTTCATCG GCATGTTCGC GGTGGCGAAC TCGGCGCTGA TCAACATGCT GATGGCCAGC
CGGCTGCTTT ACGGCCTGGC GCGGCAGGGG GTGCTGCCGC ACGGGCTGGG GCTTGTGCAT
CGCGAACGGC GCACGCCCTG GGTCGCGATC ATCTTCACCA CGCTGCTGGC CTTCGGGCTG
ATCTATTTCG TCGTCACCCG CTCGGACCTG CCGGCGGTCA GCCTGCTGGG CGGCACCACG
GCCCTGCTGC TGCTGTGCGT CTTTACCGTG GTCAACATCT CGCTGCTGGT GCTGCGCAAG
CGCCCGGTCG AGCGTCAGCA TTTCAAGGCG CCGGGCTGGG TGCCCTGGGT CGGCGCGGCG
ACCTGCGCCT TTCTGGCCGG ACCCTGGGCG CGCTCGGCCG CGCAGATGGA CCAATACAAG
GTGGCGGGCT GGCTGATCGG GATCGGCATC GTGCTGTGGG CCGCGACCTA TCTGTGGAAC
CGCGCGACAC GGCACCATGT GCCGGGCGGG CTGGAGCATG TCGAGGATCT GGCCGAACAT
CACGGCGATT CGACCCGGAA CTGA
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| Protein sequence | MTTATGTRTE PEQHTLKRVI GPKLLLLFIV GDILGTGVYA LTGTVAGEVG GAAWAPFLVA
FLVATITALS YLELVTRYPQ AAGAALYAHR AFGIHFLTFL VAFTVMCSGI TSASTASNAF
AGFMNDGFGL GFRKDGSGIL IIALGFMALV AAINFRGVGE SVKANVVLTC VELSGLLMII
FIGFYAMGQG RADFSEVMIF RSPDEKGAFL ALTAATALAF FAMVGFEDSV NMAEEVTDPV
RIFPRIMLTG LGITGVIYVL VAICAVALVP VGDLSDPDKG SALTQVVRAG APNFPFDKIF
PFIGMFAVAN SALINMLMAS RLLYGLARQG VLPHGLGLVH RERRTPWVAI IFTTLLAFGL
IYFVVTRSDL PAVSLLGGTT ALLLLCVFTV VNISLLVLRK RPVERQHFKA PGWVPWVGAA
TCAFLAGPWA RSAAQMDQYK VAGWLIGIGI VLWAATYLWN RATRHHVPGG LEHVEDLAEH
HGDSTRN
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