| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4323 |
|---|
| Symbol | |
|---|
| ID | 4582873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 1501919 |
|---|
| End bp | 1503175 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639771630 |
|---|
| Product | DNA protecting protein DprA |
|---|
| Protein accession | YP_918083 |
|---|
| Protein GI | 119387028 |
|---|
| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
|---|
| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACGA TGGCAAGGCT GCTTTCTTCG GATCCCCAGT ATACCCCTCC CGGGCCTAAG
GGGGACGGGC TTGCCATCCT GCGCCTCATC CGCTCGCGCA GGGTCGGGCC GGCGACCTTC
CACCGGCTGC TGGACGAGCA TGGCAGCGCC GAAGCGGCAT TGGCCGCCCT GCCGGCCATC
GCCCGCGCCG CAGGGGTCGA GGATTACGCC CCCTGCCCCA GAGCCGCGGC CGAGGCCGAG
ATCGCGGCCG GCCATCGCGC CGGCGCCCGA CTTCTGACCT GGGGCGACCC GGACTATCCC
GCTCTGCTGC GCGAGGTGGC CGATGCGCCT GCGGTGCTGT GGCTGCGCGG CGACATATCG
GTTCTGGCGC GCATGCCGGT GGCGGTGATC GGTGCGCGCA ACGCCTCGTC GCTGGGCTTG
CGCATGGCGC GCGGCATGGC CTCGGGCCTG TCGCAATCGG GCGCGGCGGT CGTCGCGGGC
CTCGCGCGCG GCATCGACAC CATCGCGCAT GAAGCCGCGC TGCATGGCGG CACCATCGCG
GTCATGGCCG GCGGCATCGA CAAGATCTAT CCCGGCGAGA ATGCGGCCCT GGCCGAAGAA
ATCTGCGAAA CCGGCCTGCT CGTTACCGAA CAGCCGCCGG GAACCGAGCC CGTGGCCCGG
CATTTCCCCG CCCGCAACCG CATCATCTCG GGCCTGTCGC GCGCCGTGGT GGTGGTCGAG
GCTGCATATC GTTCCGGCAG TCTGATCACC GCGCGCTGCG GGCTGGACCA GGGGCGCGAG
GTGATGGCGG TGCCGGGCCA TCCGATGGAT GCGCGGGCCG GCGGCTGCAA CGCGCTGATC
CGCGACGGCG CGACCCTGGT GCGCAATTCG GCCGATGTGC TGGCGGCGCT GCAATCGAAC
GACCCCATAG CCGCGAAGCA GGCACCGGCG GAAAACCCGG TCGAGGCCAC CCCCGCCGCG
GTGGCAGCGA TGCCCGTACA GGTCCGACAA CCAGCCGCGG TCGCCCGCCG GCTTGCGGAA
CTGGGTCACG GCATCCACCA CAGGCCGATG ATGGGCAGGC CGCGCGACGC GGGCGGTCCG
GTGAACCTGG AAGGACGGAT CCTGGCCCGG CTGGGCCCCA GCCCGACCGA GGAAAACATG
CTGATCCGCG ATCTCGGGGT GCCGGCAGCC GTCCTCGCGC CTGCCATCCT GGCGCTGGAA
CTGTCCGGTC GGGTGCAGCG CATCGCCGGC GGCAAGCTGG CGCTGAACGG CGGTTAA
|
|---|
| Protein sequence | MDTMARLLSS DPQYTPPGPK GDGLAILRLI RSRRVGPATF HRLLDEHGSA EAALAALPAI
ARAAGVEDYA PCPRAAAEAE IAAGHRAGAR LLTWGDPDYP ALLREVADAP AVLWLRGDIS
VLARMPVAVI GARNASSLGL RMARGMASGL SQSGAAVVAG LARGIDTIAH EAALHGGTIA
VMAGGIDKIY PGENAALAEE ICETGLLVTE QPPGTEPVAR HFPARNRIIS GLSRAVVVVE
AAYRSGSLIT ARCGLDQGRE VMAVPGHPMD ARAGGCNALI RDGATLVRNS ADVLAALQSN
DPIAAKQAPA ENPVEATPAA VAAMPVQVRQ PAAVARRLAE LGHGIHHRPM MGRPRDAGGP
VNLEGRILAR LGPSPTEENM LIRDLGVPAA VLAPAILALE LSGRVQRIAG GKLALNGG
|
|---|
| |