Gene Pden_4318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4318 
Symbol 
ID4582868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1497563 
End bp1498150 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content64% 
IMG OID639771625 
Productcytochrome C oxidase assembly protein 
Protein accessionYP_918078 
Protein GI119387023 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3175] Cytochrome oxidase assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0420878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG GGAAGCCAAG GTCGAACACC CGCACCGTGG CCATGCTGGC CGGCGTCGTG 
GTGCTGATGG GTGCGCTCAG CTGGGCGGCG GTGCCGTTCT ATTCCTGGTT CTGCAAGGTA
ACCGGCTTTG CCGGCACCAC CAACGTGGCC GAGGCCGCGT CGGACACGGT GCTGGACGAA
AAGATCCGGG TGCGCTTCGA CGCCAATGCG GACAGCAATC TCGGCTGGAC CTTCCGCCCG
ATGCAGCGCG AGATGGAGCT GAAGATCGGC GAGAACGCCA TCGCCTTCTA CGAGGCGATC
AACAACACCG ACGAGCCGGT GACCGGCACG GCGAGCTATA ACGTGGCGCC CGATGCGGCC
GGCTATTTCT TCAACAAGAT TGAATGCTTC TGCTTTACCG AGCAGACCCT GCAGCCGGGG
GAGCGGGTCG AGATGCCGGT CAGCTTCTTC GTCGATGCCG ATCTGGTGAA CGACCGCGAC
GCCGGTCGCA TCCGCGACAT CACCCTGTCC TATACCTTCC ATCGGACCGA TCCGCCCGCG
CCCAAACAGG CGGCGCTGGA CGCGAAAACG GAACCGACCG TAAACTGA
 
Protein sequence
MSGGKPRSNT RTVAMLAGVV VLMGALSWAA VPFYSWFCKV TGFAGTTNVA EAASDTVLDE 
KIRVRFDANA DSNLGWTFRP MQREMELKIG ENAIAFYEAI NNTDEPVTGT ASYNVAPDAA
GYFFNKIECF CFTEQTLQPG ERVEMPVSFF VDADLVNDRD AGRIRDITLS YTFHRTDPPA
PKQAALDAKT EPTVN