Gene Pden_4300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4300 
Symbol 
ID4582850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1478374 
End bp1479465 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content71% 
IMG OID639771607 
Producthypothetical protein 
Protein accessionYP_918060 
Protein GI119387005 
COG category[S] Function unknown 
COG ID[COG5429] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.919804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAA GGCGCATCAA GACGACGGCC CGGGGGCAAG AGCGGAAGGC GGCGATCCTG 
CCGGGGCTGG CCTGCGCCCT GTGGGTGCTG CTGGGCGGAT TTGCCGCGCC GGCATGGGCG
CAGGACGCCA CGCCCGGCCC GGCCCCGGAA GCGGCCCCCG CGACAGCGCC GGCGGCTGCC
CCGATGGGAT CGCAGCCCCG CGAGGGTGGC GCGGCGACCG ACGCCGCGCC GGCCTTTCTT
GCCGAAGAGG ACGAGGATGA CGGCGTCATC GGCCTGATCG AGGCGCCCGA GGGTGCGCCG
GGCGTCCCGG CCGAGGGGAT GCCGCCGGCC ATGGACCCCG ATGCGCTGGC GGCCTCGGGC
ATGGTTTCCT TTGCCGAGGT GCAGCCGCGC GCCCGCATGA TGGGTCCGGT GGGCCACCCG
CCCGTGGTGG TCGAGCTTTT CACCTCGCAG GGCTGCTCGT CCTGCCCGCC GGCCGACGAA
CTGCTGGCCG ATCTGGCCGA TCGCGAGGAC GTGCTGGCCT TGTCCTGGCA TGTGGATTAC
TGGGATTATC TGGGCTGGGC CGATGAATTC GCCCGCCCCG AATTCACTCG CCGCCAACAG
ACCTATGCGC ACCAGACGGG CGAGCGGGCC ATCTATACGC CGCAGATCAT CGTCGGCGGC
ACCGATACGC TGATCGCGCT GCGCCCGGCC GAGTTGATGG GCCTGCTTCA GACCCAGATG
GCCCGGCCGG CGCCGGTCAT GGTCTCGTCC AGCCAGGGCA AGGACGGCTA TCGCATCGAG
CTGACGCCGC GCGGCGCCAT CTCGGGCCGG GTGGCGATCA TCCTGGTGCG CTATGCGCCG
CAACGGCACG TGGCGATCAA GGCGGGCGAG AACCGCGGCA TGGCGCTGGA ATACCGCAAC
GTGGTGCTGG CGGTCGAGCG CATCGCCGAA TGGGACGGTC GCACCCCCCT GCGCATGACC
GTCAGGCGCG ACAGCCAGAA CAGCGCCGAT TTCCCCGACG ATACCCGCCA TGCCATCCTG
GCGCAGGAAC TGGGCCGCGG CGACCCGCAT TCGGCCAGCG GTCCGATTCT GGCCGCGATC
CGGCTGGACT GA
 
Protein sequence
MAARRIKTTA RGQERKAAIL PGLACALWVL LGGFAAPAWA QDATPGPAPE AAPATAPAAA 
PMGSQPREGG AATDAAPAFL AEEDEDDGVI GLIEAPEGAP GVPAEGMPPA MDPDALAASG
MVSFAEVQPR ARMMGPVGHP PVVVELFTSQ GCSSCPPADE LLADLADRED VLALSWHVDY
WDYLGWADEF ARPEFTRRQQ TYAHQTGERA IYTPQIIVGG TDTLIALRPA ELMGLLQTQM
ARPAPVMVSS SQGKDGYRIE LTPRGAISGR VAIILVRYAP QRHVAIKAGE NRGMALEYRN
VVLAVERIAE WDGRTPLRMT VRRDSQNSAD FPDDTRHAIL AQELGRGDPH SASGPILAAI
RLD