Gene Pden_4273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4273 
Symbol 
ID4582823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1444586 
End bp1445965 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content65% 
IMG OID639771580 
Productaminotransferase class-III 
Protein accessionYP_918033 
Protein GI119386978 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG ATCTGAACCC CAACGACATG TCCCATGTGG TCGCGGCCGA CCGCGCCCAT 
GTCTGGCACC ACCTGAGCCA GCACAAGCAG TATGAGACCA TCGACCCGCG TGTCTTTGTC
GAGGGCAAGG GCATGCGGCT GTGGGACGCC ACCGGGCGCG AGTTCCTCGA TGCCGTCTCG
GGCGGCGTCT GGACCGTCAA CGTGGGCTAT GGCCGCGAAA GCATCGCCGA TGCGATCCGC
GACCAGTTGG TCAAGCTGAA CTATTACGCC GGCGCGGCGG GCACCGTGCC GGGCGCGATC
TTTGCGCAGA AGCTGATCGA AAAGATGCCG GGTATGACCC GGGTCTATTA CTCGAACTCG
GGCTCCGAGG CGAACGAGAA GGTCTACAAG ATGGTGCGCC AGATCGCGGC GCGCCACCAT
GGCGGCAAGA AATGGAAGAT CCTCTATCGC GACCGCGACT ATCACGGCAC CACCATCGCC
ACGCTGGCGA CCAGCGGCCA GGACCAGCGC GCCATCGCCT ACGGCCCCTT CCCCGACGGC
TTCGTGCGCG TGCCGCATTG CCTTGAATAC CGCAAGCAAT GGGACGTGGA AAACTACGGC
GAGCGCGCCG CCGACGCCAT CGAGGAGGTG ATCCTGCGCG AAGGCCCCGA TACCGTCGGC
GCCATCGTGC TGGAGCCGGT GACGGCCGGC GGCGGCGTCA TCACGCCCCC CGAGGGCTAT
TGGCAGCGCG TGCAGGAGAT CTGCCGCAAA TACGACATCC TGCTGCATAT CGACGAGGTG
GTCTGCGGGC TTGGCCGCAC CGGCACCTGG TTCGGCTATC AGCAATACGG CATCGAGCCT
GATTTCGTCA CCATGGCCAA GGGCGTCGCC TCGGGCTATG CGGCGATCTC CTGCACCGTC
ACCACCGAGC GCGTCTTCGA GATGTTCAAG GACGCGCCCG AGGACGGCAT GAGCTTCTTC
CGCGACATCT CGACCTTCGG CGGCTGCACC TCGGGGCCGG TGGCGGCGAT CGAGAACATG
CGCATCATCG AGGACGAGGG GCTGCTCGAC AACACCGTCG CCATGGGCGA GCGCACGCTG
GCGAACCTCA ACGCGCTGAT GGAGAAGCAC AAGGTCATCG GCGACGTGCG CGGCAAGGGC
CTGTTCTGCG GCGCCGAGCT GGTCGCGGAC CGCGCCAGCA AGGAGCCGAT GGACGAAAAG
AAGGTGCAGG CCGTCGTGGC GGATTGCCTT GCGCAGGGCG TCATCATCGG CGCGACCAAC
CGGTCGTTGC CGGGCTTCAA CAACACGCTC TGCCTGTCGC CGGCGCTGAT CGCCACGGCC
GACAACATCG ACCGCATCAC CGATGCCATC GACAACGCCC TGACCAAGGT TTTTGCCTGA
 
Protein sequence
MTLDLNPNDM SHVVAADRAH VWHHLSQHKQ YETIDPRVFV EGKGMRLWDA TGREFLDAVS 
GGVWTVNVGY GRESIADAIR DQLVKLNYYA GAAGTVPGAI FAQKLIEKMP GMTRVYYSNS
GSEANEKVYK MVRQIAARHH GGKKWKILYR DRDYHGTTIA TLATSGQDQR AIAYGPFPDG
FVRVPHCLEY RKQWDVENYG ERAADAIEEV ILREGPDTVG AIVLEPVTAG GGVITPPEGY
WQRVQEICRK YDILLHIDEV VCGLGRTGTW FGYQQYGIEP DFVTMAKGVA SGYAAISCTV
TTERVFEMFK DAPEDGMSFF RDISTFGGCT SGPVAAIENM RIIEDEGLLD NTVAMGERTL
ANLNALMEKH KVIGDVRGKG LFCGAELVAD RASKEPMDEK KVQAVVADCL AQGVIIGATN
RSLPGFNNTL CLSPALIATA DNIDRITDAI DNALTKVFA