| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4248 |
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| Symbol | |
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| ID | 4582798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1414230 |
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| End bp | 1415183 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639771555 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_918008 |
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| Protein GI | 119386953 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.409634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTCC CGCCCGCCCG CCTGATGCTG AAACCCGCCC AATTGCGGCT GATCCAGCAG
ATCGCCGAAA CCGGCCAGCT GCAACTGGCG GCCGAGCGGA TCGGCATGAC CCAGCCCGCC
GCCTCGCGCA TGCTGGCCGA GATCGAGAAC CAGATCGGCG CGCAACTGTT CCTGCGCCAG
CCCAAGGGCA TGGAGCCGAC CGAGATCGGC CGCACCGTGC TGCGCCGCGC CCGCGTCATC
CTGCGCGAGA TGTCCAGCAT GGCCTCGGAC GTGCAGGCGC TGCGCGAGGG GTTCGGCGGC
GCGCTGCGCG TGGGCGCGGT GACCGGGCCG GCGGTCAGCT ACCTCGTCTC GGCCATCCGC
GAGATCAAGC AGGGCGCGCC CGAGGCCGAC ATCACCGTCG ATGTCATGCC TTCGCGCGAA
TTGCTGCTGC ACCTGGCGGC CGAAGAGATG GATTTCGTGC TGGCCCGCAT CTTGCCGGAA
TTCGACAGCC GGGATTTCAA CATCCTGCCG ATGCGGGACG AGAAGGTGGC CTTCCTGGTG
CGGGCCAGCC ATCCGCTGAG CCGCTCGCCC TCGGTCACGC TGACCGAGCT TGCCGGCCAG
GAATGGATCA TGCAGCAACG CGGCGCCCCG ATCCGCGAGG CGGCGCTGGC GGCCTTTGCC
GATGTCGGGC TGTCCGAGCC GAGAAACATC GTCAACAGCC CCTCGCTGCT TCTGACCATC
GCCTATCTGG CGCAGGGCGA TGCCGTGGCG CCGATGTCCG AGGAGGTGGC GGAACTGCTG
ATCCGGCCGC CGGTCGGGGC GGGTTTCGCC GTGCTGCAAG TGCCGCATGA GATCCGCGTC
TCGCCCTATT ACCTGCTGGA CCTGAAGCGC CGGCCCTTGT CGCCCTTGGC GATGCGACTT
CGCGAGAAGC TGGTGGCACT GTCGCAAAGC CCGGTGCGGG ACGCATTCGG CTGA
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| Protein sequence | MPFPPARLML KPAQLRLIQQ IAETGQLQLA AERIGMTQPA ASRMLAEIEN QIGAQLFLRQ
PKGMEPTEIG RTVLRRARVI LREMSSMASD VQALREGFGG ALRVGAVTGP AVSYLVSAIR
EIKQGAPEAD ITVDVMPSRE LLLHLAAEEM DFVLARILPE FDSRDFNILP MRDEKVAFLV
RASHPLSRSP SVTLTELAGQ EWIMQQRGAP IREAALAAFA DVGLSEPRNI VNSPSLLLTI
AYLAQGDAVA PMSEEVAELL IRPPVGAGFA VLQVPHEIRV SPYYLLDLKR RPLSPLAMRL
REKLVALSQS PVRDAFG
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