Gene Pden_4216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4216 
Symbol 
ID4582766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1377617 
End bp1378441 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content73% 
IMG OID639771523 
Productnitrous oxide maturation protein NosY 
Protein accessionYP_917976 
Protein GI119386921 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.101596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCC GCATCCTTTC CACCGCGGCG CTGGAGTTCC GCATCGCGCT GCGCAACCGC 
TGGGTGGCCA TCGCCACCTG CCTGATGGTG GTCTTTGCGC TGGTGCTGGC GGCGGCAGGC
GCCGCGCCCA CCGGCGATAT CGGCGCCGAC CGGCTGTCGG TCGTCGTGGC CTCGCTGACC
TCGCTGGCCG TCTATCTGGT GCCGCTGCTG GCGCTGCTGA TGAGCTTCGA CGCCGTCGCC
GGCGAGGTCG AGCGCGGCAC GCTGCCCCTG CTTCTGACCT ATCCCGTCGC ACGGGCCGAA
GTTCTGGCGG GCAAGCTGGT CGCGCATATG GCGATCCTGG CGCTGGCGGT CGGCGCGGGC
TACGGCGCCG CCGCGCTGGC GGCGGTCTGG ACCGATCCGG CCTCGACGGC CGGGCTGCCG
GCGCTGTGGC GGCTGATGTG GAGCTCCACC CTGCTGGGCG CGACCTTCCT GGGCGCGGGC
TACGCGCTTT CCAGCATCGC GCGGCGGCCC TCGGGCGCGG CGGGACTGGC GGTCGGGCTG
TGGCTGGGGC TGGTGGTGCT TTACGACCTG GGCCTGCTGG CGCTGATCGT CGCCGATGGC
GGCGGCGGCT TCACCACCGA GGTGCTGCCG GTCGCGCTGC TTGCGAACCC TGCCGACGCC
TTCCGCCTGT TCAACCTCTC GGCCGCCCAG GCCACCGCTG CCGCTGCCGG CGTGGGCGGG
GCCGCCGCGA CCATCCCGCT TTGGCAATCG GCTCTGTCGG TCCTGGTCTG GCCGCTGGCC
GCGCTTGGCC TTGCCATCGC CGCATTCCGA AAGGTCACGC CATGA
 
Protein sequence
MIRRILSTAA LEFRIALRNR WVAIATCLMV VFALVLAAAG AAPTGDIGAD RLSVVVASLT 
SLAVYLVPLL ALLMSFDAVA GEVERGTLPL LLTYPVARAE VLAGKLVAHM AILALAVGAG
YGAAALAAVW TDPASTAGLP ALWRLMWSST LLGATFLGAG YALSSIARRP SGAAGLAVGL
WLGLVVLYDL GLLALIVADG GGGFTTEVLP VALLANPADA FRLFNLSAAQ ATAAAAGVGG
AAATIPLWQS ALSVLVWPLA ALGLAIAAFR KVTP