| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4194 |
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| Symbol | |
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| ID | 4582744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1350220 |
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| End bp | 1352109 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639771501 |
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| Product | SARP family transcriptional regulator |
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| Protein accession | YP_917954 |
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| Protein GI | 119386899 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTGG ACGGCCTTTT GCAGGTTCTT GAGGCGCTGC GGCTGCGCAA GGCGCGGGCG
CTTCTGTATT TCCTGCTGGC CGACCGGACG CCGGTGCATC GCACGGAAAA GGTCACCGAC
CTGTTCTGGC AGAACTCGGA CGAGCACAAG GCCTCGGCCT CTTATCGGCA GGCGGTCAAG
CATATCCGCC GCGCCATGGA GGCCATGCCG GGCTGGGCGC TGGAAACCAG CGCGGGCGAG
ATCGCGCTGC GCCTGCCGGG CGGCTTCGTG CTGCAAGAAG AGCTGGCGGC GCGGCTGTCG
GCCTCGGGCT GGGATGCCGG CGAGGCCGGC CGCATCCGGC TGCTGATCGA CCAGACCGTG
CAGCTCGAGG GGATCAGCGC CTCGTTCGAC AGCTGGCTGG CGATCACCCG TGCCGGCCTG
CTGGCCGGGG TGCGGCAGGT GCTGGACCGC CGCCTTGCGG GGCTTGCAGG TTCCGACCCG
GAAACCCAGC GCGCGCTGGC CGAATTCGCC GTCGCGCTGG AGCCGTCGAA CGAGAACGCC
ACGCGGCTTC TGATGCGGCT CGACTGGCAG GCGGGCCGGC CGACCCGCGC CATCGAGCGC
TACAACACGC TTTACGCCCA TCTGGACGAG ATGTTCGACC AGGAGCCCGA GGCCGAGACC
GTCGAGCTGC TGGCGGCGAT CAAGCTGGAC CCCGGCGGGG GCGGGCAGCA CCGGCAGCGC
GACCGGCTGC CGCAGGCCAG CCTGTCGGTC CTGCTGCTGG AGGCCGAGGG CGAGGGGCAC
GGGCTGGAAA GCCTGACCAA CGTGCTCTTT TCGGATCTGC GCATGCGCAT GGGCCGCTTC
CGCGAATGGT GCATCGTCGA GGAGGGCGCC CCCGATCCCG CGCAGGTGCG CGTCACGCTG
AAGCCGTTCC ACCTGCCCGC CGGGCTGCGG CTTTTCGTCG AGGTGCAGCG CGGCGCCGGC
GGGCATCTGG TCTGGTCGGA ATGGATCGAG GCGCCGCAGA CCGATTGGGA GGCCAAGGTC
CGCGTCCTGC TGTCCAACAT CGCCAATGCG CTGTCGGTGG TGGTCTCGGA CCGGTCGCTG
TCGGATTCCG GCTCGGGCAT CTATGACAAC TGGCTCAGGG CGCAGGCGCT TCTGGACAGC
TGGTCGCCCG AGACCGAGGC CGAGGCGCTG GCCATCCTGC GCGAGATCGC CGCGCGCTCG
CCGCCCTTCG GCCCCGCCCA TGCCGAACTG GCGGGCGCGC TGAACGTGCG CCATGTGCTT
TTGCCCGGCA CCTACCAGAC CGAGGAGCTC AAGCGCGACG CCATGCATCA CGCCATCGTC
GCCGTCACCG CCGATCCGCT GGACACTCGC GCGCATCGCG TGCTGGCCTG GTGCTTTTGC
CATCTGGGCT ATTTCGACCT GGCCGAGTTC CATTTCGACC AGGCGCTGGT GCTGAACCGC
AACAACCCGC TGACGCTGGC CTCCTGCGCG CTCGGCTTCG CCTTTGCGGG CGATCTGGGG
AAGGCCGCCG GGCTGGTGGC CGAGACCAAG CGCCATGCCG CGGTGATGGA GCCCTTTCAC
CGGATCTATC TGGCGGCGGC GGATTATCTG TGCGGCGACT TCGCGGCGGC GGCGCGGCAA
TGCGAAGGCG GCGCCGGGCT GATGCCGACG GTGGGCGGCT GGCACAGCGC CGCCTTGTGG
CGGCTGGGAC AGGCCGAGGC GGCGGCGCGG CGGATTCACG CCTATCTGGC CGAGTTGCGC
GGGCAATGGC ACGGCCCCCC CGACCCGACG GATGCGCAGA TCCTCGACTG GTTCCTGTCC
ATCTTTCCCC TGCGCAACGA AGACTGGCGG CAAGAGCTGC GCGAGACGCT GGAACAGGCC
GGCGCGTCCA GTTGCCGCTT TCACGCCTAG
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| Protein sequence | MQLDGLLQVL EALRLRKARA LLYFLLADRT PVHRTEKVTD LFWQNSDEHK ASASYRQAVK
HIRRAMEAMP GWALETSAGE IALRLPGGFV LQEELAARLS ASGWDAGEAG RIRLLIDQTV
QLEGISASFD SWLAITRAGL LAGVRQVLDR RLAGLAGSDP ETQRALAEFA VALEPSNENA
TRLLMRLDWQ AGRPTRAIER YNTLYAHLDE MFDQEPEAET VELLAAIKLD PGGGGQHRQR
DRLPQASLSV LLLEAEGEGH GLESLTNVLF SDLRMRMGRF REWCIVEEGA PDPAQVRVTL
KPFHLPAGLR LFVEVQRGAG GHLVWSEWIE APQTDWEAKV RVLLSNIANA LSVVVSDRSL
SDSGSGIYDN WLRAQALLDS WSPETEAEAL AILREIAARS PPFGPAHAEL AGALNVRHVL
LPGTYQTEEL KRDAMHHAIV AVTADPLDTR AHRVLAWCFC HLGYFDLAEF HFDQALVLNR
NNPLTLASCA LGFAFAGDLG KAAGLVAETK RHAAVMEPFH RIYLAAADYL CGDFAAAARQ
CEGGAGLMPT VGGWHSAALW RLGQAEAAAR RIHAYLAELR GQWHGPPDPT DAQILDWFLS
IFPLRNEDWR QELRETLEQA GASSCRFHA
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