Gene Pden_4167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4167 
Symbol 
ID4582717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1323622 
End bp1324371 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content70% 
IMG OID639771474 
ProductABC transporter related 
Protein accessionYP_917927 
Protein GI119386872 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.555902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC TGGAGCTGAA TCGCATCGGC CACGCCTTTT TCGGCCGCAC CGTGCTGGAG 
GGCATCACCC TGACCGTCGA GCGGCAAGAG ATCGTGGCGC TGGTCGGGCC GTCGGGTTCG
GGCAAGTCGA CCCTCGCCCA TATCGCCGCC GGGCTGGTCG AGCCGCGCGA GGGGCGCGTC
GCCCGCCGCT ACCTTCGCCA TGCGATGGTG TTCCAGGATC CGCGACTGAT GCCTTGGGCG
ACGGCGGCCG GCAATATCGG CTTTCCGCTG CGCCTGTCGC GCGCGCCGCG CCGGATGCGG
CGCCGGATGA TCGGAGATGC CGCGCTGCGC GCCGGGCTCT TGCCCGAGGA TCTGGGGAAA
TACCCCTCCG AGCTTTCGGG CGGCATGCGC CAGCGCGCCG CCATCGCCCG CGCGCTGGTG
ACCGACCCGG ATTTCATCTA TTTCGACGAA CCCTTTACGG CGCTGGATGT CGCGCTGAAA
CGGCGGATGC AGGACCTGGT GATCGAGGCC GCCGCCTCGG CGCGGTTCGC GGCGCTGTTC
ATCACCCACG ACCTGCTGGA GGCCATCCGC ATCAGCCACC GCATCCTGGT GCTGGACGCG
GGCGGGCGCG GCATCGCGGG CGAGCGCCTG CCGCCCGGCA ACCCCGGAAC CCGCGACGAG
GCGGCGATCT TTGCCCTGCG CCAGCATTAC CTGACCGCCG ACCCGCTGTT TGCGCATATC
CACGACATCG ACGAACGGCT GCGCCCATGA
 
Protein sequence
MSLLELNRIG HAFFGRTVLE GITLTVERQE IVALVGPSGS GKSTLAHIAA GLVEPREGRV 
ARRYLRHAMV FQDPRLMPWA TAAGNIGFPL RLSRAPRRMR RRMIGDAALR AGLLPEDLGK
YPSELSGGMR QRAAIARALV TDPDFIYFDE PFTALDVALK RRMQDLVIEA AASARFAALF
ITHDLLEAIR ISHRILVLDA GGRGIAGERL PPGNPGTRDE AAIFALRQHY LTADPLFAHI
HDIDERLRP