Gene Pden_4162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4162 
Symbol 
ID4582712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1319216 
End bp1320298 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content58% 
IMG OID639771469 
Producthypothetical protein 
Protein accessionYP_917922 
Protein GI119386867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.6055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.532094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGCC GCATAATCGG CGGGGTCTCC CGCGTGGTCA GGAGAAGGGT GGCCCAGCAA 
AGGCGCTGGA TGAAAACGCG GCATCTGCAT GGCCCGGAAT TCGTGGAACT TTCCGATACG
CAAGCCATGG TGACATTGCT TGCACGCAAC TCTTCCTGGT TCATTCGGAA GTTCATCGAG
CATCATTTTT CGCTTGGCGC AGCACATATC CTTGTGATCG ACAACGGCTC GACCGATGCA
ACCGTAGATA TTTGCAGGAA TTATGATCGG CTGACCGTTC TGCAGAACGA CCTTCCGGCC
AAGCTGTATG AAAGCGCATT GCGCTCGGAA TTGTCGCAAA GGGTTGCAAA GGGCGGATGG
ATACTGTTCG CCGATTCCGA CGAGCTGATC GAAATTCCCA CCGGCGGGTT GACCCGGTTG
CTGGGATATT GCAACGATCG GGGATATACT TCGGTCTTGG GGCAAATGCT CGATCACTTC
TCAACCCTGC CCTATCGTGA GTTGCGATAT ATGGATTATG CGGAATCCAT CAAGGCGCAT
AATCTCTATT CCCTCAGGCA GATCGAGGTC ATTCCATATT TCGACCAACA TGCCACGAGC
TTCAACTGGT TCCTTCGCAA CAACATATGC GACCATCCGC AAATAAGCTT TCGGCGCGGC
GGCGTGCGGG CCGAGCTTTT CGGGGAAAAT CCCTTTCTGT CGAAACATTC CCTCGTGCGG
AACCTGCCCG GCATAACGCC GATGCCGCAC CCGCATTGCG CCACGAACGT CACGCTGGCC
GATACCATGC TGCTTGTCCG CCATTACAAA CTGGCCGGGG ATTGGGTGGC GCGCGACCGG
CTGGCGATCC GCGAGGGCCG GTGGGATCAC GGCGAGGACA GCAGGCGCAT TTCCGCCATC
GGCGACGAAA ACGCCATGCG GCTGGACCCG CAGGAGCCTC GTCCATGGCG CGGGATCGAT
ACCTTGCGGG ACGAGGGCTT TCTGTTCTCG TCAGCGGAGT TTCTCGCCGC CATGCAGGAC
GATCCCGAAA CATCCGGCCA AGTCGCATGC GCCCAGATCA GAGCAGGGGG AGCGGGTCTT
TGA
 
Protein sequence
MISRIIGGVS RVVRRRVAQQ RRWMKTRHLH GPEFVELSDT QAMVTLLARN SSWFIRKFIE 
HHFSLGAAHI LVIDNGSTDA TVDICRNYDR LTVLQNDLPA KLYESALRSE LSQRVAKGGW
ILFADSDELI EIPTGGLTRL LGYCNDRGYT SVLGQMLDHF STLPYRELRY MDYAESIKAH
NLYSLRQIEV IPYFDQHATS FNWFLRNNIC DHPQISFRRG GVRAELFGEN PFLSKHSLVR
NLPGITPMPH PHCATNVTLA DTMLLVRHYK LAGDWVARDR LAIREGRWDH GEDSRRISAI
GDENAMRLDP QEPRPWRGID TLRDEGFLFS SAEFLAAMQD DPETSGQVAC AQIRAGGAGL