Gene Pden_4149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4149 
Symbol 
ID4582699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1306726 
End bp1307286 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content64% 
IMG OID639771456 
Productthioredoxin SoxW 
Protein accessionYP_917909 
Protein GI119386854 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2143] Thioredoxin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGA TCCGTGCCCT GGCCGCCTGC CTGTTGCTGG CCGCGACACC CGCAGCCGCG 
GTCGAAACCG GCGATGACGG CCTGCACAAG CCCACCTGGC TGCGCGAGAC CTTCAAGGAC
CTGCGCGAGG ATCTGGCCGA GGCCAATGCA GAGCAGAAGC GCCTGCTGAT CCTGGTCGAG
CAGCGCGGCT GCATCTATTG CGCCGAGATG CACGAGAAGG TCTTTCCCGA CCCCGAGATC
GACGCGCTGA TCCGCGACGG CTATTTCGTC GTCCAGATGA ACCTGTTCGG CGATGTCGAG
GTCACGGATT TCGACGGCAC CGCGCTTTCG GAAAAGGACA TGGCGGTGCG CTGGGGCGTC
ATGTTCACGC CGACGATGAT CTTCCTGCCC GAGGACGTTC CCGAGGGACA GACCGCCTCC
GAAGCGGCCG TCGCCCTGAT GCCGGGCGCG TTCGGCAAGG GCACCACCAG CGCCCTGCTG
ACCTGGGTTC GGGCGCATGG CTATGAAAAT GGCGAGCATT TTCAAAAGTT TCTTGCGCGC
GAACTGGAGC GCAAGAACTA A
 
Protein sequence
MKPIRALAAC LLLAATPAAA VETGDDGLHK PTWLRETFKD LREDLAEANA EQKRLLILVE 
QRGCIYCAEM HEKVFPDPEI DALIRDGYFV VQMNLFGDVE VTDFDGTALS EKDMAVRWGV
MFTPTMIFLP EDVPEGQTAS EAAVALMPGA FGKGTTSALL TWVRAHGYEN GEHFQKFLAR
ELERKN