Gene Pden_4138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4138 
Symbol 
ID4582688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1295411 
End bp1296175 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content71% 
IMG OID639771445 
ProductABC transporter related 
Protein accessionYP_917898 
Protein GI119386843 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.19179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCCGC TGATTTGCGC CGCCGACCTG TCGGTCAGCC ATGGCGGCGA TCTGCCGGTG 
CTGAGCCATG TCGATTTCCT GATCCGCCCA GGCGAGATCG TCACCGTGGT CGGCCCGAAC
GGCTCGGGCA AGTCGACGCT GGTGCGGGCG CTTCTGGGCC ATGTCTCGCT GTCCTCGGGC
CGGGTCGAGC GCGTGCCCGG GCTGCGCATC GGCTATGTCC CGCAGCGCGT GCATATCGAG
CGGGCCATGC CGATGACCGT GCGCCGCTTC CTGTCGCTGC CGCGCCGGGT CGGCGATGCG
CAGGCCGCCG CCGCGCTTGA GCGGACCGGC GTGCCGGGGC TAGAGGGCCG CCAGATCACC
GCGCTGTCCG GCGGGCAGTT CCAGCGCGTC CTGCTGGCCC GCGCATTGCT CGGCGATCCG
CAGCTTCTGG TGCTGGACGA GCCGACGCAG GGCCTGGACC AGCCCGGCAT CGTCGCCTTC
TACAAGCTGA TCGAGGAGGT CAGGGCCGAA ACCCGCGCCG CCGTGCTGAT GGTCAGCCAC
GACCTCTTGG TGGTCATGCG CGCCTCGGAC CGGGTGGTCT GCCTGAACGG CCATATCTGC
TGCGAGGGCA CGCCGCAGGC GGTCAGCGCC GCCCCCGCCT ATCGCGCCCT GTTCGGCAGC
GAGGCGCAGG GCACGCTGGC GCTTTACCAG CATCACCACG ATCACGACCA CGACCATGTC
GCAGAGGGCC ATCGCCACGG CCCGGCCTGC GCCCATCCGC ATTGA
 
Protein sequence
MTPLICAADL SVSHGGDLPV LSHVDFLIRP GEIVTVVGPN GSGKSTLVRA LLGHVSLSSG 
RVERVPGLRI GYVPQRVHIE RAMPMTVRRF LSLPRRVGDA QAAAALERTG VPGLEGRQIT
ALSGGQFQRV LLARALLGDP QLLVLDEPTQ GLDQPGIVAF YKLIEEVRAE TRAAVLMVSH
DLLVVMRASD RVVCLNGHIC CEGTPQAVSA APAYRALFGS EAQGTLALYQ HHHDHDHDHV
AEGHRHGPAC AHPH