Gene Pden_4050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4050 
Symbol 
ID4582601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1201059 
End bp1201466 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content71% 
IMG OID639771359 
Productisoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_917812 
Protein GI119386757 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.207243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGTTCG CATCGGCCGG GGCGGTGCTG GGATGGCTGG TCCCGCTGGG CCTGCCCGTC 
GCCTTGCGAT GGGCGGGCCT TTTGCTGATC GGGGCGGCGC TGGCCCTGAT GCTCTGGGCG
GCGCTGACCA TGGCGCGGGC GCGCACCACC GTCATGCCCG GCCGCCGCCC CGAGGCGCTG
GTGACCACCG GCCCGTTCCG CTTCTCGCGC AATCCGATCT ATCTGGGCGA CCTGATTCTG
CTGGCCGGGC TGATGCTGGC GCTGCGGACC CCGGCGGGCC TGGTCACGGT GCCCGCCTTC
GCCCTGTTCC TGCAACGCCG CTTCATCCTG CGCGAAGAGG CCGTCATCGC CGCCGCTTTC
GGTTCCGCCT ATGACCGCTA TAGGATGCAG GTCAGGCGCT GGATCTAG
 
Protein sequence
MLFASAGAVL GWLVPLGLPV ALRWAGLLLI GAALALMLWA ALTMARARTT VMPGRRPEAL 
VTTGPFRFSR NPIYLGDLIL LAGLMLALRT PAGLVTVPAF ALFLQRRFIL REEAVIAAAF
GSAYDRYRMQ VRRWI