Gene Pden_4036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4036 
Symbol 
ID4582587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1185903 
End bp1187045 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content64% 
IMG OID639771345 
Productrod shape-determining protein RodA 
Protein accessionYP_917798 
Protein GI119386743 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02210] rod shape-determining protein RodA 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.924124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATC TGAACTATCA CGTCGCGCAG GTGCCGACGG GCTGGCGCAA GATCCTGCAC 
CTGAACTGGC CGCTGGTGTT CCTGGTCACC GCCGTCAGCT GCATCGGCTT TCTGATGCTC
TATTCCGTCT CGGGCGGCGA TATCGACAGA TGGGCCGGCC CGCAGATGGA GCGCTTTGCC
GTCGGCATGG TGCTGATGTT CGCGCTGGCC TTCGTGCCGA TCTGGTTCTG GCGCTCGATC
TCGGTGGCCT CCTATGTGAT CTGCGTGGGC CTGCTGGTGC TGGTCGAGGT GATCGGCCAT
GTCGGCATGG GCGCGCAGCG CTGGCTGGTG CTGGGGCCGG TGCGCATCCA GCCGTCCGAG
CTGACCAAGG TCGCCTTCGT GATGACTCTG GCGGCCTATT ACGACTGGCT GCCGGTCGAA
AAGGTCTCGC GCCCGTTCTG GGTGCTGATC CCGGTCATCC TGATCCTGCT GCCGACCGGG
CTGGTGCTGA TGCAGCCCGA CCTGGGCACC TCGATCATGC TGGTCGCCGG CGGCGGCATC
GTCATGTTCG CGGCGGGCGT CAGCCTGTGG TATTTCGCCG GCGTCATCGC CATCGTCGTC
GCCGGCGTCA CCACAGTGAT GGAAAGCCGC GGCACCGACT GGCAATTGCT GCACGACTAT
CAGTTCCGCC GCATCGACAC CTTCCTCGAC CCGGGCTCGG ACCCGCTGGG TGCGGGATAC
AACATCGCGC AGGCGCAGAT CGCGCTGGGA TCGGGCGGCT GGTCGGGGCG CGGCTTCATG
CAGGGCACGC AATCGCGGCT GAACTTCCTG CCCGAAAAGC ACACCGACTT CATCTTCACC
TCGCTGGCCG AGGAATTCGG CTTCGTCGGC GCCTTCAGCC TGCTGATGCT CTATGTGCTG
ATCCTGGGGT TCTGCATGTA TTCGGCGCTG ACCAACCGCG ACCGCTTCGC CAGCCTGCTG
ACCATTGGCA TCGCCGGGAC GTTCTTCCTT TACTTTTCCA TCAACATGGC CACGGTGATG
GGCATGCTGC CCGCCAAGGG CTCGCCCCTG CCCCTGGTCA GTTACGGAGG AACCTCGCTG
ATGATCCTGT TGATGGCCTT TGGCATCGTC CAATCCGCCC ATGTCCATCG CCCCCGGGGC
TGA
 
Protein sequence
MSYLNYHVAQ VPTGWRKILH LNWPLVFLVT AVSCIGFLML YSVSGGDIDR WAGPQMERFA 
VGMVLMFALA FVPIWFWRSI SVASYVICVG LLVLVEVIGH VGMGAQRWLV LGPVRIQPSE
LTKVAFVMTL AAYYDWLPVE KVSRPFWVLI PVILILLPTG LVLMQPDLGT SIMLVAGGGI
VMFAAGVSLW YFAGVIAIVV AGVTTVMESR GTDWQLLHDY QFRRIDTFLD PGSDPLGAGY
NIAQAQIALG SGGWSGRGFM QGTQSRLNFL PEKHTDFIFT SLAEEFGFVG AFSLLMLYVL
ILGFCMYSAL TNRDRFASLL TIGIAGTFFL YFSINMATVM GMLPAKGSPL PLVSYGGTSL
MILLMAFGIV QSAHVHRPRG