Gene Pden_4033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4033 
Symbol 
ID4582584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1182497 
End bp1183429 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content69% 
IMG OID639771342 
Productrod shape-determining protein MreC 
Protein accessionYP_917795 
Protein GI119386740 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCA AGGGCCCAGA TTACGCGGCT CCGGTCCGCC GCATCCTGGT TTCGCTGCTG 
GTGCTGGTGC TGCTGGCGGT GTTCCTGTTC TGGCAGATCG ACAGCCCCAG GGCCGAACGG
ATGCGCGCGG CCTTCATCGA CCGCTTCGTG CCCAGCTTCG ACTGGGTGAT GGCGCCGGTG
ACCAAGGTCT CGCGCATGGT GGCGGGGTTC CAGTCCTATG CCCGGCTCTA CGAGCAGAAT
CAGGAATTGC GCCGCGAGTT GCAGAAGATG TCGGCCTGGA AAGAGGCCGC GGTTCAGCTC
GAGCAGGAAA ACGCCAAGCT GCTGGCGCAG AACAATGTGA GGATCGACCC GGCGCTGACC
TCGGTCTCGG GCGTGGTGCT GACCGACAGC GGCACGGCCT TCCGGCAATC GGTGCTGCTG
AACGTGGGCG CGCGCGACGG CATCGTCGAC GGCTGGGCGA CCATGGACGG GCTGGGGCTG
GTCGGGCGCA TCTCGGGCGT GGGGCAGACC ACCAGCCGGG TGATGCTGCT GACCGATCCC
TCCAGTCGCA TCCCGGTGAC CATCCTGCCC TCGGGGCAAC ATGCGCTGCT GACCGGGGAC
AACACCACCC TGCCGGCGCT GGATTTCATC GAAAGCCCGG AAAACCTGCG TCCCGGCGAC
CGGGTGGTCA GCTCGGGCGA CGGAGGCGTG TTCCCGCCGG GCCTGCCGGT GGGCCAGGTG
GCGCTGGCCA GCGACGGCCG GCTGCGGGTG CGGCTGGCCG CCGATTACGG CCGGCTGGAA
TTCCTGCGCG TGCTGCGCAG CCATCCGGCC GAGCAACTGG CCGATACCGG GCTGCTGATC
CCGCCCCCGG CGACCGAGTT CATCGGCCCG CCCATGCCGC CGCTGGCCGA TCCGCAGGAC
GCCGAGGCCG GGAACGGGGA CGCAGATGAT TGA
 
Protein sequence
MARKGPDYAA PVRRILVSLL VLVLLAVFLF WQIDSPRAER MRAAFIDRFV PSFDWVMAPV 
TKVSRMVAGF QSYARLYEQN QELRRELQKM SAWKEAAVQL EQENAKLLAQ NNVRIDPALT
SVSGVVLTDS GTAFRQSVLL NVGARDGIVD GWATMDGLGL VGRISGVGQT TSRVMLLTDP
SSRIPVTILP SGQHALLTGD NTTLPALDFI ESPENLRPGD RVVSSGDGGV FPPGLPVGQV
ALASDGRLRV RLAADYGRLE FLRVLRSHPA EQLADTGLLI PPPATEFIGP PMPPLADPQD
AEAGNGDADD