Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4033 |
Symbol | |
ID | 4582584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 1182497 |
End bp | 1183429 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639771342 |
Product | rod shape-determining protein MreC |
Protein accession | YP_917795 |
Protein GI | 119386740 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCA AGGGCCCAGA TTACGCGGCT CCGGTCCGCC GCATCCTGGT TTCGCTGCTG GTGCTGGTGC TGCTGGCGGT GTTCCTGTTC TGGCAGATCG ACAGCCCCAG GGCCGAACGG ATGCGCGCGG CCTTCATCGA CCGCTTCGTG CCCAGCTTCG ACTGGGTGAT GGCGCCGGTG ACCAAGGTCT CGCGCATGGT GGCGGGGTTC CAGTCCTATG CCCGGCTCTA CGAGCAGAAT CAGGAATTGC GCCGCGAGTT GCAGAAGATG TCGGCCTGGA AAGAGGCCGC GGTTCAGCTC GAGCAGGAAA ACGCCAAGCT GCTGGCGCAG AACAATGTGA GGATCGACCC GGCGCTGACC TCGGTCTCGG GCGTGGTGCT GACCGACAGC GGCACGGCCT TCCGGCAATC GGTGCTGCTG AACGTGGGCG CGCGCGACGG CATCGTCGAC GGCTGGGCGA CCATGGACGG GCTGGGGCTG GTCGGGCGCA TCTCGGGCGT GGGGCAGACC ACCAGCCGGG TGATGCTGCT GACCGATCCC TCCAGTCGCA TCCCGGTGAC CATCCTGCCC TCGGGGCAAC ATGCGCTGCT GACCGGGGAC AACACCACCC TGCCGGCGCT GGATTTCATC GAAAGCCCGG AAAACCTGCG TCCCGGCGAC CGGGTGGTCA GCTCGGGCGA CGGAGGCGTG TTCCCGCCGG GCCTGCCGGT GGGCCAGGTG GCGCTGGCCA GCGACGGCCG GCTGCGGGTG CGGCTGGCCG CCGATTACGG CCGGCTGGAA TTCCTGCGCG TGCTGCGCAG CCATCCGGCC GAGCAACTGG CCGATACCGG GCTGCTGATC CCGCCCCCGG CGACCGAGTT CATCGGCCCG CCCATGCCGC CGCTGGCCGA TCCGCAGGAC GCCGAGGCCG GGAACGGGGA CGCAGATGAT TGA
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Protein sequence | MARKGPDYAA PVRRILVSLL VLVLLAVFLF WQIDSPRAER MRAAFIDRFV PSFDWVMAPV TKVSRMVAGF QSYARLYEQN QELRRELQKM SAWKEAAVQL EQENAKLLAQ NNVRIDPALT SVSGVVLTDS GTAFRQSVLL NVGARDGIVD GWATMDGLGL VGRISGVGQT TSRVMLLTDP SSRIPVTILP SGQHALLTGD NTTLPALDFI ESPENLRPGD RVVSSGDGGV FPPGLPVGQV ALASDGRLRV RLAADYGRLE FLRVLRSHPA EQLADTGLLI PPPATEFIGP PMPPLADPQD AEAGNGDADD
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