| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4019 |
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| Symbol | |
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| ID | 4582570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1167267 |
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| End bp | 1168502 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639771328 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_917781 |
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| Protein GI | 119386726 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.70134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGC AACCCTTCAT CCTGCGCAAT CCCTCGGTCC TGGTCGTCCT GGCATTGCTG
GCCGCCTTTA CCCTTGCCGT CACGCTGATG AGCACGGCCT ACGGGTCGGG CGCCCTTCCG
ACCTCGACCG TCAAGGTGCT GGGCAAGACG CTGTGCCTGG CGCTGGCCGC CGTGGCGATG
GATCTGGTCT GGGGCTATCT GGGCATCCTG TCCCTGGGGC AGATGGCCTT CTTCGCCCTG
GGCGGCTACA TGATCGGGCA ATGGCTGATG TATGCCCGGA CCGAGGCCAT CGTCGCCGCC
TCGCTTTCCG GCAACCCGAT CCCGCCCACC GTGCAGGAGT TGCGCGAGGC CGTGGCCAAC
CAGATCTTCG GCGTCGTCGG CTCGGCGGAC CTGCCGCTGG TCTGGACCCT GGCCCATTCG
CTGACGGCGC AACTGGTCCT GGTGGTCGCG GTGCCGGGGC TGCTGGCGCT TGTCTTCGGC
TGGCTCGCGT TCCGGTCGCG GGTCAACGGC GTCTACCTGT CGATCCTGAC GCAGGCGATG
ACGCTGGCGC TGGCGCTGTG GCTGTTCCAG AACGACAGCG GCTTTCGCGG CAATAACGGG
CTGTCGGGAT TGCAGAACAT CCCCGGCCTG GACGGGGTGG GGCAGGCGCG GCTGTCGGTC
TGGTTCCTCT GGGCCTCGGC CGCCGCCCTG GCGCTGTTCT ACGTCCTGGC CGCATGGGTG
GTCGGCGGCA AGTTCGGCAG CGTCATCCGC GCCATCCGCG ACGACGAGAC CCGCGTGCGC
TTCCTGGGCT ATCCGGTCGA GGGCTTCAAG CTGGCGGTCT TTACCCTGGC CGCGATGATC
ACCGCGATTG CGGGCGCGCT CTATTACCCG CAGGCGGGCA TCATCAACCC GGCGGAACTG
ATGCCCATCG CCTCGATCTA CCTGGCGGTC TGGGTCGCCA TCGGCGGGCG CGGGCGGCTT
TACGGCGCGA TGATCGGCGC CATCGTGGTC TCGCTGCTGT CCAGCTGGTT CACCGGCGGG
CGGGCGCCCG ACCTGAACCT GCCGGGCTAT GCGGTCAAAT GGGTGGACTG GTGGCAGGTG
GCGCTTGGCC TGTCCTTCGT GCTGGTGACG CTGTTCGCCC CCAAGGGCAT CGCGGGCATC
TTCGACCGGT TGGCGGGCAT CCTGCCGCCG CGCCGCCATG GCCGCGACCT TGGCCCCGAC
CAGGGCGCAT TGCAGGAACA GGAGGCCAAG GCATGA
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| Protein sequence | MTRQPFILRN PSVLVVLALL AAFTLAVTLM STAYGSGALP TSTVKVLGKT LCLALAAVAM
DLVWGYLGIL SLGQMAFFAL GGYMIGQWLM YARTEAIVAA SLSGNPIPPT VQELREAVAN
QIFGVVGSAD LPLVWTLAHS LTAQLVLVVA VPGLLALVFG WLAFRSRVNG VYLSILTQAM
TLALALWLFQ NDSGFRGNNG LSGLQNIPGL DGVGQARLSV WFLWASAAAL ALFYVLAAWV
VGGKFGSVIR AIRDDETRVR FLGYPVEGFK LAVFTLAAMI TAIAGALYYP QAGIINPAEL
MPIASIYLAV WVAIGGRGRL YGAMIGAIVV SLLSSWFTGG RAPDLNLPGY AVKWVDWWQV
ALGLSFVLVT LFAPKGIAGI FDRLAGILPP RRHGRDLGPD QGALQEQEAK A
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