Gene Pden_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3996 
Symbol 
ID4582547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1134611 
End bp1135465 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content70% 
IMG OID639771305 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_917758 
Protein GI119386703 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.428683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.224886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGG ACGGACCACA GCCGGGCCGG TTGCGCGGCG CCTTGCAGCG CGGACGCGAC 
AAATGGGCCG ATCTCTGGCC GCGCCTTCTG TCGGGCGCGG TGCTGGCGGT GCTGGGGCTG
TTGCTGCTGC TGTCCTCGGG GCTTTGGATC CGGCTGGGCG TCTCGGCCGT CATCGGGGTG
ATGATGTGGG AACTGGCGCG GCTGACCGGC TGGCGCCATC CCGAATTCCG CAGCCCGCGC
CATCCGGTGC TGATCGCCAT CCTGTCGGGG CTGGTGATGC TGGCCATGCT GGTGCTGCCC
GGCGACTGGC CGATGGCGCT GGCACTGGTG CCGATGATCG CCGGCTGGCA CGGCACGCAT
GAACACGAAC GCCCGGCCTA TCTGCTGTTC ACCCTGGCGA TCCTGGGTGC CGGCTATGCG
CTGGTGGTGA TCCGCGAGGT GATGGGCCTG CCGACGCTGG CCTGGATCGT CGGCACCGTG
GTGCTGTCCG ACGTGCTGGG CTATTTCATC GGCCGCAAGC TGGGCGGGCC GCGCTTCTGG
CCGGCGATCA GCCCCAAGAA GACCTGGAGC GGCACCATCG CCGGCTGGGC GGGCGCGCTG
GTGCTGGCGC TGGTCCTGAT GCTGGCCGGG CAGGCGCCCT GGCCGGTCCT GGTGCTCGGC
CCGCTGATCG CGCTGGCCGG GCAGTTCGGC GACATCGCGG AAAGCTGGCT CAAGCGCCGG
GTCGGGGTCA AGGACAGTTC CGATCTGATC CCCGGCCATG GCGGCGTCCT GGACCGTTTC
GACGCCATGT CCGGGGCGTT GCTCATGGCG CTGCTGCTTT TGATCGGCGA TCTCTTACCC
GTTATCGGAG GCTGA
 
Protein sequence
MSGDGPQPGR LRGALQRGRD KWADLWPRLL SGAVLAVLGL LLLLSSGLWI RLGVSAVIGV 
MMWELARLTG WRHPEFRSPR HPVLIAILSG LVMLAMLVLP GDWPMALALV PMIAGWHGTH
EHERPAYLLF TLAILGAGYA LVVIREVMGL PTLAWIVGTV VLSDVLGYFI GRKLGGPRFW
PAISPKKTWS GTIAGWAGAL VLALVLMLAG QAPWPVLVLG PLIALAGQFG DIAESWLKRR
VGVKDSSDLI PGHGGVLDRF DAMSGALLMA LLLLIGDLLP VIGG