Gene Pden_3994 details

Gene Information

• Locus tag: Pden_3994
• Symbol: frr
• ID: 4582545
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Paracoccus denitrificans PD1222
• Kingdom: Bacteria
• Replicon accession: NC_008687
• Strand: +
• Start bp: 1133313
• End bp: 1133876
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639771303
• Product: ribosome recycling factor
• Protein accession: YP_917756
• Protein GI: 119386701
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0233] Ribosome recycling factor
• TIGRFAM ID: [TIGR00496] ribosome recycling factor

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.544367
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.379983
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCCGACG AGATCGAGAT CGACACCGAC GACCTGGAGC GCCGCATGAA GGGCGCGATG 
GAATCCCTGC GCCATGAATT CGCCTCGCTG CGCACCGGCC GCGCCTCGGC CAGCATGGTC 
GAGCCGATCA TGGTCGATGC CTACGGCTCG CCCACGCCGA TCAACCAGAT CGGCACGGTG 
AACGTGCCCG AACCGCGCAT GGTCACGATC AACATCTGGG ACAAGGGCCT GGTCGGCAAG 
GCCGAGAAGG CGATCCGCGA ATCGGGCCTG GGCATCAACC CGCAGCTCAA CGGCACCATC 
ATCATGCTGC CGATCCCCGA GCTGAACGAA GAGCGCCGGC GCGAACTGAC CCGCGTCGCC 
GCGCAATATG CCGAACATGC CCGCGTCGCC ATCCGCAACG TGCGGCGCGA CGGCATGGAC 
CAGATCAAGA AGGCCAAGTC CTCGGGCATG TCCGAGGACG ACCAGAAGTT CTGGGAGGGC 
GCCGTGCAGG AACTGACCGA CAAGATGATC GCCTCGGTGG ATCAGGCGCT CGAGGCCAAG 
CAAGCCGAAA TCATGCAGGT CTGA 

 

Protein sequence

MSDEIEIDTD DLERRMKGAM ESLRHEFASL RTGRASASMV EPIMVDAYGS PTPINQIGTV 
NVPEPRMVTI NIWDKGLVGK AEKAIRESGL GINPQLNGTI IMLPIPELNE ERRRELTRVA 
AQYAEHARVA IRNVRRDGMD QIKKAKSSGM SEDDQKFWEG AVQELTDKMI ASVDQALEAK 
QAEIMQV