| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3980 |
|---|
| Symbol | |
|---|
| ID | 4582531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1118822 |
|---|
| End bp | 1119541 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639771289 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_917742 |
|---|
| Protein GI | 119386687 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.301883 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCG AAGCCACCCC CGGGGGACGC GGCGGCGCCG AGCAGCCGAT CCGCGATGCC
GCCACCATCA TCGTGCTGGA CCGCAATGCC CATGACGGGC CGTCGGTGCT GATGGGGCAA
AGGGGCGCTT CGGCTGTGTT CATGCCCTCG AAATACGTCT TTCCCGGCGG TGCGGTGGAT
GCCGCCGATG CGCAAGCGCG GCTGGCCGGC GACCTGCCGC CCCGCAGCGC GGCCCTGCTG
GCGGCTGAAC CGCGCATCGA CTCGCAGGTG ACGCCGCTGG CGCTGGCTGC CGCCGCCCTG
CGCGAACTGG CCGAGGAGAC CGGCCTGCTG ACCGGCCCCC CTGGCCCCGC GCCCGAGGGC
TGGGACCATT ACGCCGGCGC CGGGTTGGCG CCCGATCCCT CGGCGCTGAT CTACATGTTC
CGCGCCATCA CCCCGCCCGG CCGGCCGCGC CGTTTCGATG CGCGTTTCCT GCTTCTGGAT
GCCGAGCGGC TGCATGGCGA CCGCAACGAT TTCAGCGCCG CCTGCGACGA GCTTTCGCAT
CTGCATTGGG TGCCGCTGAC CGAGGCGCGG GCGCTGGACC TGCCCTTCAT CACCGAGGTG
GCGCTGGCCG AAGTGGCAAG CCTGCTGGCG GCGGCCGGGG ACGGGCCGCT GGCGCTGCCG
CAATCCGTGC CTTTCTTCGA CAACCGGCTG GCGACCCCAC GCTTCCTGCG CATCGGCTAG
|
|---|
| Protein sequence | MTIEATPGGR GGAEQPIRDA ATIIVLDRNA HDGPSVLMGQ RGASAVFMPS KYVFPGGAVD
AADAQARLAG DLPPRSAALL AAEPRIDSQV TPLALAAAAL RELAEETGLL TGPPGPAPEG
WDHYAGAGLA PDPSALIYMF RAITPPGRPR RFDARFLLLD AERLHGDRND FSAACDELSH
LHWVPLTEAR ALDLPFITEV ALAEVASLLA AAGDGPLALP QSVPFFDNRL ATPRFLRIG
|
|---|
| |