Gene Pden_3974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3974 
Symbol 
ID4582525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1113790 
End bp1114233 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content64% 
IMG OID639771283 
Productcytochrome c-type biogenesis protein CcmE 
Protein accessionYP_917736 
Protein GI119386681 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2332] Cytochrome c-type biogenesis protein CcmE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCTT TGAAGAAAAA GCGCCGTATC CAGATCCTCG TCGCCGCTGC CGTGGCCCTT 
GTCCTGGCCG TCGGGCTGAT CGGCTATGGA TTTCGCGACG GCATCAACCT GTATCGCTCG
CCCAGCCAGA TGGCCGAGAA CCCGCCCGAG GCCGGCGAGG TCTTTCGCCT TGGCGGGCTG
GTCGAGGATG GCAGCCTGGT GCGCGGCGCC AGCGAGACGG TGACTTTTCG CGTGACCGAC
GGCGGCGCCA CCGTCCCGGT GCGCTTTACC GGCGTGCTGC CCGACCTTTT CTCCGAGGGC
CAGGGCATGA TCGGCACCGG GCGGATGGAG GGCGAAACCT TCGTTGCCTC CGAGATCCTG
GCCAAGCACG ACGAGAATTA CATGCCGCGC GAGGTCATGG ATTCGCTCAA GGAGCAGGGC
GTCTATCAGG AGCCGAATTC CTGA
 
Protein sequence
MKSLKKKRRI QILVAAAVAL VLAVGLIGYG FRDGINLYRS PSQMAENPPE AGEVFRLGGL 
VEDGSLVRGA SETVTFRVTD GGATVPVRFT GVLPDLFSEG QGMIGTGRME GETFVASEIL
AKHDENYMPR EVMDSLKEQG VYQEPNS