Gene Pden_3961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3961 
Symbol 
ID4582512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1098421 
End bp1099953 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content72% 
IMG OID639771270 
ProductMg chelatase, subunit ChlI 
Protein accessionYP_917723 
Protein GI119386668 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGGG GAGAGCCGAT GGCGGCGATT GCCTATACCG TGGCCTTCGA CGGGGTCGAG 
GCGCGGCTGG TCGAGGTGCA ATGTTCGGTC TCGCCGGGCC TGCCGGGCTT CGGTATCGTC
GGCTTGCCCG ACAAATCGGT CAGCGAGGCG CGCGAACGGG TCAAGGCCGC CTTCGGGGCC
TTGTCCATCG CCATGCCCTC GCGGCGGGTG ACGGTGAATC TTTCGCCCGC CGACCTGCCC
AAGGAGGGCT CGCATTTCGA CCTGCCCATC GCGCTTGCCG TGCTGGCCGC GCTGGAAATC
GTCCCGGCCG AGGCGCTGGA GCGCGTGGTG GCGCTGGGGG AACTGGCACT GGACGGGCGG
CTTTCGCCGG TCGCGGGCGC CCTGCCCGCC GCCATGGCCG CGGCCGAGGA AAGCCGCGCG
CTGCTGCTGC CGCGCGCCTG CGGGGCCGAG GCCGCCTGGG TCGGCGCCGT GCCGGTCCTT
GCGCCGCGCA CCCTGCGCGA GGCGGTCGAC CACCTGACCG ACCGCGCCCC CCTGGCCCGC
GCCGCGCCCG GCGAACTGGC CGAGACCGTG TTCGAAGCCG ACCTCTCCGA GGTGAAGGGC
CAGGAACGCG CCCGCCGCGC GCTGGAGATC GCCGCGGCCG GCCGGCACCA TCTGCTGATG
GTCGGTCCGC CCGGTGCCAG CAAATCCATG CTTGCGACCC GCCTGCCCGG CATCCTGCCG
CCGCTCAACC CGCAGGAGGC GCTGGAAACC TCGGTGATCC ATTCCGTCGC CGGCCTGCTC
GACGGGGGCG GTATCTCGCG CATGGCCCCC TTTTGTCAGC CGCATCATAC CGCCTCGATG
GCCGCGATGG TGGGCGGTGG CCGCAATGCC CGGCCGGGCC AGGCCAGCCT GGCCCATAAC
GGCGTGCTGT TCCTGGACGA ACTGCCCGAA TTCGAACGCC GCGTCATCGA CGCATTGCGC
GAGCCGATCG AGACCGGCGA GATCCACGTC TCGCGTGCCA ATGCCCATAT CCGCTATCCG
GCGCGTTTCC TGCTGGTCGC AGCAGCCAAT CCCTGCCGCT GCGGCGAGAT CGCCGATGCC
GCGCGGGCCT GTTCCAAGGC GCCGCGCTGC GGGTCGGACT ACCTGGGCCG CATCTCGGGT
CCGATGATGG ACCGCTTCGA CCTGCGCATC GAAGTGCCGC AGGTCGCGAT CGAGGATCTG
GGCCTGCCGG CGACGGGGGA AAGCTCGGCC AGCGTCGCCG CGCGTGTCGC CTCAGCCCGC
GCGCTGCAAG CCGCCCGCTT TGCCGGCCAT CCGACGGCGC GGGTGAACGC CGACGCCTCG
GGCCGGCTGC TGGAAGAGGT CGCGCCGCTC GACGGCGAAT GCCGGTCGCT GCTGGCGCTG
GCAGCCGAGC GGCTGGGGCT GACCCCGCGC GGCTATCATC GCATCCTGCG CAGCGCACGC
ACCATCGCCG ATCTGGACGG CTCGCCCGCC ATCCGCCAGC CGCATCTGGC AGAGGCGCTG
TCCTATCGCC TGCCCTTCGG CCGGCCGGAT TGA
 
Protein sequence
MMRGEPMAAI AYTVAFDGVE ARLVEVQCSV SPGLPGFGIV GLPDKSVSEA RERVKAAFGA 
LSIAMPSRRV TVNLSPADLP KEGSHFDLPI ALAVLAALEI VPAEALERVV ALGELALDGR
LSPVAGALPA AMAAAEESRA LLLPRACGAE AAWVGAVPVL APRTLREAVD HLTDRAPLAR
AAPGELAETV FEADLSEVKG QERARRALEI AAAGRHHLLM VGPPGASKSM LATRLPGILP
PLNPQEALET SVIHSVAGLL DGGGISRMAP FCQPHHTASM AAMVGGGRNA RPGQASLAHN
GVLFLDELPE FERRVIDALR EPIETGEIHV SRANAHIRYP ARFLLVAAAN PCRCGEIADA
ARACSKAPRC GSDYLGRISG PMMDRFDLRI EVPQVAIEDL GLPATGESSA SVAARVASAR
ALQAARFAGH PTARVNADAS GRLLEEVAPL DGECRSLLAL AAERLGLTPR GYHRILRSAR
TIADLDGSPA IRQPHLAEAL SYRLPFGRPD