| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3943 |
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| Symbol | |
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| ID | 4582494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1080857 |
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| End bp | 1081543 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639771252 |
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| Product | pyrimidine 5'-nucleotidase |
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| Protein accession | YP_917705 |
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| Protein GI | 119386650 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTC GGCATGTCAC CACCTGGATC TTCGATCTGG ACAACACGCT TTATGCGCCC
GAGGTCAGGC TTTTTGCCCA GATCGAGCAG CGCATGACCG CCTATGTCAT GCGCGAGCTG
CGCGTGACCG AGGCCGTGGC GAACCGGCTG CGCAGCCATT ACTGGCGCGA GCACGGCACC
ACGCTGGCCG GGCTGATGGC CGAACACGGC ATCGCCCCGC TGCCCTATCT GCGCGATGTC
CACGACATCG ACTTCACCGT TCTGACGCCC GACCCGGAAC TGGCCGGGTT GATCTCGGCC
CTGCCCGGCC GCAAGATCGT GCATACCAAT GGCGACAGCG CCTATGCGAC GCGGGTGCTG
GAGCACCGCG GGCTGATGGT GTTCGATGCA ATCCACGGCG TCGAGGAGGT GGGTTTCTAC
CCCAAGCCGG ACCCGCGCGC TTATGCCGCA GTTCTGGCCG CCGAAGGCTT CGAGCCGTCC
CGCGCCGCCA TGTTCGAGGA CGACCCCCGC AACCTTGCCA TCCCGCATCG GCTTGGAATG
CGGACGATTC TCGTCGGAAC CGGCCGTCAT GGCCCGGACG ATCTGGCCGA AGGCCAGGAC
CACGGCCCGC ATGTCCACTA TCGCACCCAG GATCTGGGCG AATTCCTGCG CGGGCTTGCC
GCAAGCGGCG GTCCGGGTAA GATCTGA
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| Protein sequence | MDFRHVTTWI FDLDNTLYAP EVRLFAQIEQ RMTAYVMREL RVTEAVANRL RSHYWREHGT
TLAGLMAEHG IAPLPYLRDV HDIDFTVLTP DPELAGLISA LPGRKIVHTN GDSAYATRVL
EHRGLMVFDA IHGVEEVGFY PKPDPRAYAA VLAAEGFEPS RAAMFEDDPR NLAIPHRLGM
RTILVGTGRH GPDDLAEGQD HGPHVHYRTQ DLGEFLRGLA ASGGPGKI
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