| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3941 |
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| Symbol | |
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| ID | 4582492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1077900 |
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| End bp | 1079264 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639771250 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_917703 |
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| Protein GI | 119386648 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAC CGATCACCGC CTTCACCTGC ACCGCCTGCG GCGCCAGCCA TCGCAAATGG
GCCGGCCGCT GCGACGCCTG CGGCGCCTGG AACACCGTCA TCGAGGAAGC GCCGCTCAGC
CAGGGCCCCG GCCGCGGCCT CGGCACGCTC AAGGGCAAGC CTATCCCGCT TTCGGGCCTC
GCCACGCAGG ATGCGCCGCC CAGGCGCGCC ACCTCCGGCA TCGCCGAGCT CGACCGGGTG
CTGGGCGGCG GGCTGGTCCC CGGCTCGGCC ATTCTCGTCG GCGGCGATCC GGGCATCGGC
AAGTCCACCC TGCTGCTGCA GGCCGCCGCC GCCTTTGCCC GCGCCGGTCA GCAGGCGATC
TATGTCTCGG GCGAGGAAGC CAGCGCCCAG GTCCGGTTGC GCGCACAGCG CCTGGGCCTG
GGCGACGCGC CCGTCCGCCT GGGTGCCGAG ACCGCGCTGC GCGACATCCT GACCACGCTC
GACGCCGAGC GCCCCGACGT GGCGGTGATC GACTCGATCC AGACGCTCTG GTCCGACCGG
ATCGAGGCCG CGCCCGGCTC GGTGGCGCAG GTCCGCGCCA GCGCGCATGA ACTCGTCATC
TTCGCCAAGC GGCGCGGCAC CTCGGTCATC TTGGTCGGCC ATGTCACCAA GGAGGGCCAG
ATCGCCGGCC CCCGCGTGGT CGAGCACATG GTCGACACCG TGCTGTATTT CGAGGGCGAG
CGCGGCCACC AGTTCCGCAT CCTGCGCGCC CACAAGAACC GTTTCGGCCC CGCCGACGAG
ATCGGCGTCT TCGAGATGAC CGGGGGCGGG CTTGCCGAGG TCGCCAACCC CTCGGCGCTG
TTCCTGTCCG AACGCGGCGA GGCCAGCGCC GGCTCGGCGG TCTTTGCCGG GATCGAGGGC
ACGCGCCCGG TGCTGACCGA GGTGCAGGCG CTGGTCGCCC CCTCGACATT GGCAAGTCCC
CGCCGAACCG TGGTCGGGCT GGATGGCGGA CGGGTCTCGA CCATCCTCGC CGTGCTCGAG
GCGCGCTGCG CCGTCCCCTT CGCGGGTCTC GACGTTTTCC TCAATGTTGC CGGGGGGATG
CGCGTCAGCG AGCCCGCCGC AGACCTTGCG ATCGCCGCCG CGCTGCTCAG CGCGCGCGAG
GACGTGGCGC TGCCGCCCGA GGCGGTGCTT TTCGGCGAAA TCAGCCTCTC GGGCGCACTG
CGGCCCGTCG CGCAGGCGGA AAACAGGTTG AAAGAGGCGC AGAAACTTGG TTTTTCACGA
GCGATCCTGC CTTCGGCCAC CAAGGTCGAG GGCGTGGCCG GGATGCGAAT CGACCGCATC
GCGGATCTGA CAAGTTTCGT GGGCGAGACA TTCGGCGCCG GATGA
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| Protein sequence | MAKPITAFTC TACGASHRKW AGRCDACGAW NTVIEEAPLS QGPGRGLGTL KGKPIPLSGL
ATQDAPPRRA TSGIAELDRV LGGGLVPGSA ILVGGDPGIG KSTLLLQAAA AFARAGQQAI
YVSGEEASAQ VRLRAQRLGL GDAPVRLGAE TALRDILTTL DAERPDVAVI DSIQTLWSDR
IEAAPGSVAQ VRASAHELVI FAKRRGTSVI LVGHVTKEGQ IAGPRVVEHM VDTVLYFEGE
RGHQFRILRA HKNRFGPADE IGVFEMTGGG LAEVANPSAL FLSERGEASA GSAVFAGIEG
TRPVLTEVQA LVAPSTLASP RRTVVGLDGG RVSTILAVLE ARCAVPFAGL DVFLNVAGGM
RVSEPAADLA IAAALLSARE DVALPPEAVL FGEISLSGAL RPVAQAENRL KEAQKLGFSR
AILPSATKVE GVAGMRIDRI ADLTSFVGET FGAG
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