Gene Pden_3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3935 
Symbol 
ID4582486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1072372 
End bp1073130 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content70% 
IMG OID639771244 
Producthypothetical protein 
Protein accessionYP_917697 
Protein GI119386642 
COG category[S] Function unknown 
COG ID[COG5388] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACG ATCACGGACA GGACGGGGAT TCCCCGCGCA GGCCCGATTT TCCCCGGAAC 
CGGCCGGGAA AACTGCTGCA TCTTGCCGAT TATGAGCCCG TACAGATGGA CCGAATACTG
GGCGAATTGC GCGGTTACTG GGAGGGGTTG CGCCATGGCC GCGCCATTCC CGACCGCGCC
GATGTCGAGC CGCGCGGCAT CCGTCGGGCG CTGGATTACG CCTTTATCCT GGAGCGCATC
GCCCCCGGCG CGGCCCGGCT CCGCCTGGCC GGACGCCATC TGGTCGACCT GATGGGGATG
GAGGTGCGCG GCATGCCGCT TTGCGCCCTG CTGCACACCA GTTCGCGTGG CCGGTTGTCG
GATGTGCTGG AAAGCGTGTT TCGCGGCCCG CAGATCGCCG AGATCGTGCT CGATTCCCCC
GCTGGTTATG GCCGGCCGGC GCTGAGCGGC CGGATGCTGC TCTTGCCGCT GCGCTCGGAC
CTGGGGGACG TGACGCGGGC GCTTGGCTGC CTGATCGCCG AGGGCCGGAT CGGCGAAGCC
CCGCGGCGCT TCGACCTGCG CTCGGATGCG GAGTTCCCGG TCATTCCCGG CGCCAGGGTG
CTGGAGCCTT CGCCTTCGTC GCCGGGATTC GCCGAGCCTC CGCCGCGCTG GGGCGGCACC
CCGCCGGCCG AACCGCCGTC CAAGGACGCA AGCCCCGAGG AACGCCGTGC CCGCTTTCAT
GTCGTCAGCA GCGACAAGCC GCCTGGCATC GGCTTCTGA
 
Protein sequence
MSDDHGQDGD SPRRPDFPRN RPGKLLHLAD YEPVQMDRIL GELRGYWEGL RHGRAIPDRA 
DVEPRGIRRA LDYAFILERI APGAARLRLA GRHLVDLMGM EVRGMPLCAL LHTSSRGRLS
DVLESVFRGP QIAEIVLDSP AGYGRPALSG RMLLLPLRSD LGDVTRALGC LIAEGRIGEA
PRRFDLRSDA EFPVIPGARV LEPSPSSPGF AEPPPRWGGT PPAEPPSKDA SPEERRARFH
VVSSDKPPGI GF