Gene Pden_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3931 
Symbol 
ID4582482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1067429 
End bp1068334 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content64% 
IMG OID639771240 
ProductABC transporter related 
Protein accessionYP_917693 
Protein GI119386638 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCA TGAAGCAGGG GAGCGCTATG ATCCAGGTCC ACGACCTGCA CAAGCATTTC 
GGAGGCTTCC GCGCCGTCGA TGGCGCCAGC CTGACGATCG AGAAAGGCTC GATCACCGGG
TTGATCGGTC CGAACGGAGC CGGGAAATCT ACTCTTTTCA ACGTGATCGC CGGGGTTCTG
AAACCGACTT CCGGCCACGT CACCATGGCG GGCGAGGATA TCACCGGCCT GCCGCCGCAT
GAGCTGTTCC ACAAGGGGCT CCTGCGCACC TTCCAGTTGG CGCACGAGTT TTCGTCGATG
ACCGTGCGCG AGAACCTGAT GATGGTGCCG GGCGCGCAGT GTGGCGAGAC TCTGGTCAAT
ACCTGGTTCC GCCGCGGCCG CATCCGCGAG GAAGAGCGCG CGCTTCGCAA GAAAGCCGAC
GAAGTCCTTG AGTTCCTGAC CATTTCCCAT GTCGCCGACG AAAAGGCCGG CAACCTGTCC
GGTGGCCAGA AGAAGCTTCT GGAACTGGGC CGCACCATGA TGGTGGATGC CAGGATCGTC
TTTCTGGACG AGGTCGGCGC CGGGGTGAAC CGCACGCTTC TGGGCACCAT CGGCGATGCC
ATCGTGCGGC TGAACAAGGA GCGCGGCTAT ACCTTCTGCG TGATCGAGCA CGACATGGAC
TTCATCGGCC GGCTTTGCGA CCCGGTGATC GTCATGGCGG CAGGCAAGGT GCTGGCCCAG
GGCTCGGCCG ACAGCATCAT GAAGAACGAG GCGGTGATCG AAGCCTATCT GGGCACCGGG
CTCAAGAACA AGGTCGCCGC CGAAGTGGCC GAGGAAGCCG CATTCGGCGA AAGCCACGGC
GCCCAGCCCG GTCTTGGCGC CGAGGCCGGG CGCGGCGGCG ACGGCAAGCC AGCGGGGGAT
ATGTGA
 
Protein sequence
MQRMKQGSAM IQVHDLHKHF GGFRAVDGAS LTIEKGSITG LIGPNGAGKS TLFNVIAGVL 
KPTSGHVTMA GEDITGLPPH ELFHKGLLRT FQLAHEFSSM TVRENLMMVP GAQCGETLVN
TWFRRGRIRE EERALRKKAD EVLEFLTISH VADEKAGNLS GGQKKLLELG RTMMVDARIV
FLDEVGAGVN RTLLGTIGDA IVRLNKERGY TFCVIEHDMD FIGRLCDPVI VMAAGKVLAQ
GSADSIMKNE AVIEAYLGTG LKNKVAAEVA EEAAFGESHG AQPGLGAEAG RGGDGKPAGD
M