Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3915 |
Symbol | |
ID | 4582466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1049608 |
End bp | 1049958 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639771224 |
Product | transthyretin |
Protein accession | YP_917677 |
Protein GI | 119386622 |
COG category | [R] General function prediction only |
COG ID | [COG2351] Transthyretin-like protein |
TIGRFAM ID | [TIGR02962] hydroxyisourate hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.471177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGTT ATCTCACCAC CCATGTGCTC GACACCGCCA ATGGCACGCC CGCGCAGGGC ATGCGGATCG AGCTCTACCG CCTCGACCCC GAACGCCGGC TGATCGCCGA GACCGTCACC AACCACGACG GCCGCACCGA CAGCCACATC CTGCCCGAGG CCGCGTTCCA GACCGGCGAA TACGAGCTCG TCTTCCATGT CGGCGCATGG CTGGACGCCC AGGGACACCA GGCCGCGAAG CCCCGCTTTC TCGACCAGGT GCCCTTGCGC TTCGGCATGT CGGAACAGGA CCATTACCAT GTGCCGCTGC TGATCTCGCC CTACGGCTTC TCGACCTATC GCGGCAGCTG A
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Protein sequence | MPGYLTTHVL DTANGTPAQG MRIELYRLDP ERRLIAETVT NHDGRTDSHI LPEAAFQTGE YELVFHVGAW LDAQGHQAAK PRFLDQVPLR FGMSEQDHYH VPLLISPYGF STYRGS
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