Gene Pden_3902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3902 
Symbol 
ID4582453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1036274 
End bp1037143 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content76% 
IMG OID639771211 
Producthypothetical protein 
Protein accessionYP_917664 
Protein GI119386609 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.201945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACCCT CGGCCGATCA GCTTCGCGCC CGGGCCGAGG CCGCCTCGGC GGCGTTGCCG 
GCGCTGATGC TGTCGGCCGA GCGGCTGGCG GCGGCGCTGG TGCCGGGCGC GCATGGCCAG
CGCCGCGCCG GCATGGGCGA GGATTTCTGG CAATACCGTC CCGCCACCAC GGGCGACACG
GCGCGCAGCA TCGACTGGCG CCGCTCGGCC CGCTCGGATG CGCAATTCGT CCGCGACCGC
GAGGCGCAGG TGGCGCAATC GGCGGCGATC TGGGTCTCGG CCGCGGCGGG CATGGACTAT
ACCGGCGGCA CGGACCGGCC CGGCAAGCGC GACCGTGCCG ACCTGCTGGC GCTGGCGTTG
GCCATGGCGC TGCTGGCCGG GGGCGAGCGC GTGGCGCTGG CCGGCCAGCC GCCGCGCCCT
GGCCGCCTGC AGGCCGAGCG CATGGCCCAG GCGCTGGTCG CCCGCCCGGC GCTGGACCGC
GACGAGGATG CGCCGCCGGC CGAGGCCTTG CGTCCCGGCC AGCGGGTGAT CCTGTTCGAC
GATTTCCTGG GCGATCCGCA GCCGGTGCTG GACTACCTTT CCCGCGCCGC CGGCCTGGGC
GTGCAGGGCG TGCTGATGCA GGTCCTGGAC CCGGACGAGG ACGGCTTTCC CTGGCGGGGC
GCGGTGTTGT TCCGCTCGGC CTCGGGCGCT CTGCGCCACG ACACGCGCGA CGCGGCCGGG
CTGCGCACGG CCTATCTGGC GCGGCTGGCC GAGCGGCGCG AGGTGCTGTC GCGCGCCGCC
GCGACCGCGG GCTGGCATTT CGGCATGCAT GACACCGGGG CGCCGCCGTC GCAGGCGTTG
CTCTGGCTCT GGTCGGTGCT GGAGGGCTGA
 
Protein sequence
MRPSADQLRA RAEAASAALP ALMLSAERLA AALVPGAHGQ RRAGMGEDFW QYRPATTGDT 
ARSIDWRRSA RSDAQFVRDR EAQVAQSAAI WVSAAAGMDY TGGTDRPGKR DRADLLALAL
AMALLAGGER VALAGQPPRP GRLQAERMAQ ALVARPALDR DEDAPPAEAL RPGQRVILFD
DFLGDPQPVL DYLSRAAGLG VQGVLMQVLD PDEDGFPWRG AVLFRSASGA LRHDTRDAAG
LRTAYLARLA ERREVLSRAA ATAGWHFGMH DTGAPPSQAL LWLWSVLEG