Gene Pden_3879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3879 
Symbol 
ID4582430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1014604 
End bp1015134 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content72% 
IMG OID639771188 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_917641 
Protein GI119386586 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.332564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.90981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGC TTGCCGACAC TCCGCTGATT GCGACCGAGC GTCTGGTCCT GCGCGCGCCG 
CAGGCCGGCG ACTGGCCGGC ATGGCGCGAT TTCGCGACCA GCGAGCGGGC GCGCTGGATC
GGCGGCCCGA TGGTCGAGCC GGGACAGGCT TGGCGCGCCT TCGGCCATAT CGTCGGGCAT
TGGGTGCTGC GCGGCTTTGG CTCCTTTGTC GTGACGGATC GCGACAGCGG CGCGCCGCTC
GGCTCGGTCG GCCCCTGGTT TCCGGATGGC TGGCCCGAGC ATGAGCTGGG CTGGACGCTG
TGGACCGCCG AGGCCGAGGG CAGGGGCATC GCCCATGAGG CGGCGCTGGC CACCCGCGAC
TTCGCCGCCC GCGAACTGGG CTGGACCAGT GCCGTCAGCT ACATCCTGCC CGGCAATACC
CGCTCGGCCG CGCTGGCCGA AAGGCTGGGC GCGCAGCGCG ACCCGGATGC CGCGCATCCC
GGCAAGGAGC CCTGCCTCGT CTATCGCCAT CCCATGGGGG CCGCCGCATG A
 
Protein sequence
MIRLADTPLI ATERLVLRAP QAGDWPAWRD FATSERARWI GGPMVEPGQA WRAFGHIVGH 
WVLRGFGSFV VTDRDSGAPL GSVGPWFPDG WPEHELGWTL WTAEAEGRGI AHEAALATRD
FAARELGWTS AVSYILPGNT RSAALAERLG AQRDPDAAHP GKEPCLVYRH PMGAAA