| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3874 |
|---|
| Symbol | |
|---|
| ID | 4582425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1008225 |
|---|
| End bp | 1009139 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639771183 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_917636 |
|---|
| Protein GI | 119386581 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGCCT TGGCGCAACC GACAAGGATA CGGACCGTCC GCATGGCGCT GACCCGCCGC
TCGACCCTTG CGATCCTGGC CGCGCTGGCC GCCGGACCGG TGGTGGCGCG GCAGGAACTG
CTGGATCTGG CCTATTCGGA CAGCTCGCCC CGCAACCTGC TGGACATCCA CCTCCCGCGG
GGCGACGGGC CGTTTCCCTG GCTGCTCGAC CTGCATGGCG GCGGATTCCG CGCCGGCGAC
AAGCGGCTGC TGCCGGTGCC GCCGCAGCTT GGCGAAAGCG GCATCGCCGT GGTGCGGATG
AATTACCGGC TGTCGAATCA GGCACGCTGG CCCGCGCAGG AGCAGGACGT TCTGGCCGCC
GCAGCCTTTC TGAACCGCCA CGGGCCGGAT CTGGGCCTGG CGCCGGGCCG GATGGCCCTT
GGCGGTCGTT CGGCCGGGGC GTTCATGGCT GTATCCGCGG CACTGACGCT GGTGCAGGAC
GGCAGGCCGC CGCGAGCGGT GGTCGATTTC TATGGGCCGA TGGATTTCGG CAGCATGGAT
GCGGATATGG CGCGCATGGA CGGCAAGCCG ACGCGGCTGC CGGCCGATTC GCCGAAAAGC
GCCGAATCGC TGCTGGTCGG CTATGCCGTG GGCCAACGCC GCGCCGAGGC GACGGCGCTG
TCGCCCGTGG GCCGGCTGCG CGCCATGCGC CCCGGCACCG CCCTGCCGCC GCTGTTGATC
CGGCATGGGG CGCGCGACCG CATCGTGCCC CCGGGACAGG CGCGCCGCCT GCGCGAGGCC
TGGCAGGAGA TCGACCCCGA GGCGCCGGTC GATTTCGCCC TGCTGCCGGA TGAAGGTCAT
GGCAGCGTCG GCTTTGCCAG CACAAGGACG CGGGGGCAGC TCGCCGCCTT CCTGGCGCGG
CATCTGGCGG GATAG
|
|---|
| Protein sequence | MLALAQPTRI RTVRMALTRR STLAILAALA AGPVVARQEL LDLAYSDSSP RNLLDIHLPR
GDGPFPWLLD LHGGGFRAGD KRLLPVPPQL GESGIAVVRM NYRLSNQARW PAQEQDVLAA
AAFLNRHGPD LGLAPGRMAL GGRSAGAFMA VSAALTLVQD GRPPRAVVDF YGPMDFGSMD
ADMARMDGKP TRLPADSPKS AESLLVGYAV GQRRAEATAL SPVGRLRAMR PGTALPPLLI
RHGARDRIVP PGQARRLREA WQEIDPEAPV DFALLPDEGH GSVGFASTRT RGQLAAFLAR
HLAG
|
|---|
| |