Gene Pden_3833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3833 
Symbol 
ID4582384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp968814 
End bp969986 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content68% 
IMG OID639771142 
Producthypothetical protein 
Protein accessionYP_917595 
Protein GI119386540 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.682095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATCG AGCGCCGTAT CACCGCAACC GTGAAGTCCC TTCTGGACGA CAGTCCCGCC 
GTTGCCCTGC TGGGGCCGCG CCAGGTAGGC AAGACCACGC TGGCCCAGGA GCTGGGGGAT
GCGCGCCCCT CGCTCTATCT CGATCTCGAA TCCAGCGCCG ACCGGGCCAG GCTCTCGGAC
CCCGAACTCT ACCTTTTGGC GCATGAGGAC AAGCTGGTCA TCCTTGACGA GGTCCAGCGG
GTGCCGGACC TGTTCCAGAA CCTGCGCGGC CTGATCGACC GGGGGCGGCG CAAGGGGCTG
AGGGCGGGCC GGTTCCTGCT GCTCGGCTCC GCTTCCATCG ACCTGCTGCG GCAATCCGGC
GAGACGCTGG CGGGCCGGAT CGCCTATGCC GAACTCGCCC CCCTCGATGC GCTGGAGGTT
CCCGCTGCCG ATCTGGACCG GCTCTGGCTG CGCGGCGGCT TTCCCGACAG CTTCCTCGCC
AAGGGCGATC AGGCCAGCCT GCGCTGGCGG CGCGACTTCA TCCGCACCTA TCTGGAGCGC
GACATTCCCG CACTCGGCCC CCGCATCGCG GCCGAGACGC TGCGGCGCTT CTGGACCATG
CTGGCGCATC GGCAATCCGG CCTGTCGAAC GCCGCCGAAC TTGCCCGCGC GCTTGGGGTC
GATGCCAAGA CCGTCGCCTC CTATCTCGAT CTGCTGGTCG ATCTGATGCT GGTGCGCCGC
CTGGAGCCCT GGCATGCGAA TATCGGCAAG CGGCTGGTCA AGTCCCCGCG CATCTATGTG
CGCGACACTG GCATCCTGCA CGCGCTTCTG GGGCTGACGA CGCTGGATGA CGTTCTTGGC
CACCCCGTTG CGGGGGCGAG CTGGGAGGGG CTGATCATCG AGACCGCCCA TGCCCTGATG
CCGGAAGGGA CGCAGGCGCA GTTCTACCGC AGCGGTGCGG GGGCCGAGGT CGATCTGGTG
CTCACCCTGC CGGGCGGCGC GGTCTGGGCC GTCGAGGTCA AGCGCAACCT TGCGCCCAAG
GTCGAGCGCG GCTTCCACTC GGCCTGCGAA GACCTGAAGC CAGAGCGGCG GATCGTGGTC
TATCCGGGGG ATGAGGCTTT CCCGCTGCCG AACGGCATCG AGGTCATGTC GCTGCACCAG
TTCGGGCGGG ATCTGCTGGC GCTTCATCCG TAA
 
Protein sequence
MLIERRITAT VKSLLDDSPA VALLGPRQVG KTTLAQELGD ARPSLYLDLE SSADRARLSD 
PELYLLAHED KLVILDEVQR VPDLFQNLRG LIDRGRRKGL RAGRFLLLGS ASIDLLRQSG
ETLAGRIAYA ELAPLDALEV PAADLDRLWL RGGFPDSFLA KGDQASLRWR RDFIRTYLER
DIPALGPRIA AETLRRFWTM LAHRQSGLSN AAELARALGV DAKTVASYLD LLVDLMLVRR
LEPWHANIGK RLVKSPRIYV RDTGILHALL GLTTLDDVLG HPVAGASWEG LIIETAHALM
PEGTQAQFYR SGAGAEVDLV LTLPGGAVWA VEVKRNLAPK VERGFHSACE DLKPERRIVV
YPGDEAFPLP NGIEVMSLHQ FGRDLLALHP