| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3728 |
|---|
| Symbol | |
|---|
| ID | 4582280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 876103 |
|---|
| End bp | 877131 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639771038 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_917491 |
|---|
| Protein GI | 119386436 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.315534 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.558522 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGAAAC AGCGCAAGCC CTATGTCACG CTCAAGCGCA CCGGCGGCAA GGCTCGCTGG
TATTACCGCC TGACGTGGTT CGAGGGCGCG CGCCGTCGAG AGCGGTTCAT CCCCCTGCCA
GACGACCCGG ACAGCGAGGA ATTCGACCGG GCCTATTGGT CGATCCGCTC GGGCACCAGC
GAGGAAGTCC AGAGGCCGAA AAAGGAAACG TGGCGGCAAC TGGTAATGGC CTATCGGGGC
AGCGCCGGGT TCCGAAAGCT CGCGCCCCGC ACCCAGAAGT CCTACAATGA CACGATTGAA
TGGATTCTGT CAGCGAACGC CGACAAGGCG GTATCGACCA TCACCAAGCA GAAGCTGCGC
GACCTGCACG TCAAGTATGG GGAGACGCCG CGCAAGGCTG ATATGCTGGT GCAGATGGTT
TCGATCCTGG TCAACTTCGC GCGCACCCAG CTTGAATGGG CCGTCACGAA TCCAGCCGAG
GGACTGACGC TCTACGGGAA GCAGCGGGAA TATGAGCCTT GGCCGGAATG GATGGTGAAG
GCGCTGCCAG ACGCCCCGCT GGTCGTCCGC AGCGCGGCCG AACTGATCCT CGGCACTGGA
CAGCGCCCAT CAGCGGCCAT CGTCATGCGA CGCGATCAGT TCCACGGAGA ATGGATGACC
GTCACCGACG AGAAGGGCGA CGAGAGCTAT GAGATATTCT GCCCGCAGGA GCTCCGTTCC
TATCTCGCCA GCCTGCCGGT TGCCGGACAG CACGTCATTC CGCGCAACCT GACCCAGCCC
ATGCGATACG ATTCGGTCGA GAAGGCGTTC CGGGCATGGC GCACCGATCT GGGCGACCGC
GCCCGGCCCT TCTCACTGCA TGGTCTGCGC AAGCTGTCAA TCATCAGGCT GGCCGAGGCT
GGATGCACGG ACGCCGAAAT TCAGGCGATC ACCAACCAGT CCGCGCAGAC CGTCGCCTAT
TATCGCAAGC GCGCGAATCG AAAGAAACTG TCACGGGCAG CGATGGAACG GAACGGGGAC
AGAACATGA
|
|---|
| Protein sequence | MRKQRKPYVT LKRTGGKARW YYRLTWFEGA RRRERFIPLP DDPDSEEFDR AYWSIRSGTS
EEVQRPKKET WRQLVMAYRG SAGFRKLAPR TQKSYNDTIE WILSANADKA VSTITKQKLR
DLHVKYGETP RKADMLVQMV SILVNFARTQ LEWAVTNPAE GLTLYGKQRE YEPWPEWMVK
ALPDAPLVVR SAAELILGTG QRPSAAIVMR RDQFHGEWMT VTDEKGDESY EIFCPQELRS
YLASLPVAGQ HVIPRNLTQP MRYDSVEKAF RAWRTDLGDR ARPFSLHGLR KLSIIRLAEA
GCTDAEIQAI TNQSAQTVAY YRKRANRKKL SRAAMERNGD RT
|
|---|
| |